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ArticleCombinatorial chemistry & high throughput screening2024

A Six-gene Prognostic Model Based on Neutrophil Extracellular Traps (NETs)-related Gene Signature for Lung Adenocarcinoma.

Guiyan Mo, Xuan Long, Limin Cao, Yuling Tang, Yusheng Yan, Ting Guo

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Article in Combinatorial chemistry & high throughput screening, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

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6citing papers in PubMed, 1 pooled it
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1 · What the graph read from it

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it.

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  6. ERH Impacts Patient Prognosis and Tumor Immune Microenvironment: A Pan-Cancer Analysis.Combinatorial chemistry & high throughput screening · 2025
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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Guiyan MoDepartment of Respiratory and Critical Care Medicine, The Affiliated Changsha Hospital of Xiangya School of Medicine, Central South University, Changsha, 410005, Hunan, China.
Xuan LongDepartment of Respiratory and Critical Care Medicine, Shanghai Tenth People's Hospital, Tongji University School of Medicine, Shanghai, 200072, China.
Limin CaoDepartment of Respiratory and Critical Care Medicine, Lianyungang Second People's Hospital, Lianyungang, 222000, Jiangsu, China.
Yuling TangDepartment of Respiratory and Critical Care Medicine, The Affiliated Changsha Hospital of Xiangya School of Medicine, Central South University, Changsha, 410005, Hunan, China.
Yusheng YanDepartment of Respiratory and Critical Care Medicine, The Affiliated Changsha Hospital of Xiangya School of Medicine, Central South University, Changsha, 410005, Hunan, China.
Ting GuoDepartment of Respiratory and Critical Care Medicine, The Affiliated Changsha Hospital of Xiangya School of Medicine, Central South University, Changsha, 410005, Hunan, China.

Funding

Lianyungang Second People's Hospital Young and Middle-aged Medical Talents Growth Fund TQ202102Scientific Research Project of Changsha Municipal Health Commission KJ-B2023057
6 · The paper itself

Abstract

backgroundLung adenocarcinoma (LUAD) is one of the most common malignant cancers. Neutrophil extracellular traps (NETs) have been discovered to play a crucial role in the pathogenesis of LUAD. We aimed to establish an innovative prognostic model for LUAD based on the distinct expression patterns of NETs-related genes.

methodsThe TCGA LUAD dataset was utilized as the training set, while GSE31210, GSE37745, and GSE50081 were undertaken as the verification sets. The patients were grouped into clusters based on the expression signature of NETs-related genes. Differentially expressed genes between clusters were identified through the utilization of the random forest and LASSO algorithms. The NETs score model for LUAD prognosis was developed by multiplying the expression levels of specific genes with their corresponding LASSO coefficients and then summing them. The validity of the model was confirmed by analysis of the survival curves and ROC curves. Additionally, immune infiltration, GSEA, mutation analysis, and drug analysis were conducted. Silencing ABCC2 in A549 cells was achieved to investigate its effect.

resultsWe identified six novel NETs-related genes, namely

conclusionAltogether, this study has identified a novel NET-score signature based on six novel NET-related genes to predict the prognosis of LUAD and ABCC2 and has also explored a new method for personalized chemo-/immuno-therapy of LUAD.

Indexed as

Adenocarcinoma of LungExtracellular TrapsLung NeoplasmsMultidrug Resistance-Associated Protein 2A549 CellsGene Expression Regulation, NeoplasticHumansNeutrophilsPrognosisABCC2 protein, humanMultidrug Resistance-Associated Protein 2ABCC2.drug predictionLung adenocarcinomaneutrophil extracellular trapsprognostic modelrandom forest

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.