Evidence map›Paper›PMID 38356732›Full record

ArticleEClinicalMedicine2024

The comprehensive English National Lynch Syndrome Registry: development and description of a new genomics data resource.

Catherine Huntley, Lucy Loong, Corinne Mallinson, Rachel Bethell, Tameera Rahman, Neelam Alhaddad, Oliver Tulloch, Xue Zhou, Jason Lee, Paul Eves and 9 more

Open access · goldAbstract read
In one paragraph

Article in EClinicalMedicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 11 citations in OpenAlex.

  1. Guideline
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 6 institutions in 1 country.

Catherine HuntleyDivision of Genetics and Epidemiology, The Institute of Cancer Research, Sutton, UK.
Lucy LoongDivision of Genetics and Epidemiology, The Institute of Cancer Research, Sutton, UK.
Corinne MallinsonNational Disease Registration Service, NHS England, London, UK.
Rachel BethellNational Disease Registration Service, NHS England, London, UK.
Tameera RahmanNational Disease Registration Service, NHS England, London, UK.
Neelam AlhaddadNational Disease Registration Service, NHS England, London, UK.
Oliver TullochNational Disease Registration Service, NHS England, London, UK.
Xue ZhouNational Disease Registration Service, NHS England, London, UK.
Jason LeeNational Disease Registration Service, NHS England, London, UK.
Paul EvesNational Disease Registration Service, NHS England, London, UK.
GMSA Lynch Consortium
Fiona McRonaldNational Disease Registration Service, NHS England, London, UK.
Bethany TorrDivision of Genetics and Epidemiology, The Institute of Cancer Research, Sutton, UK.
John BurnTranslational and Clinical Research Institute, Newcastle University, Newcastle, UK.
Adam ShawGuy's and St Thomas' NHS Foundation Trust, London, UK.
Eva J A MorrisBig Data Institute, Nuffield Department of Population Health, University of Oxford, Oxford, UK.
Kevin MonahanThe Lynch Syndrome and Family Cancer Clinic, St Mark's Hospital and Academic Institute, Harrow, London, UK.
Steven HardyNational Disease Registration Service, NHS England, London, UK.
Clare TurnbullDivision of Genetics and Epidemiology, The Institute of Cancer Research, Sutton, UK.
National Cancer Registration Service · GBInstitute of Cancer Research · GBGuy's and St Thomas' NHS Foundation Trust · GBNewcastle University · GBOpen Data Institute · GBSt Mark's Hospital · GB

Funding

Cancer Research UK 27223Wellcome Trust
6 · The paper itself

Abstract

Background: Lynch Syndrome (LS) is a cancer predisposition syndrome caused by constitutional pathogenic variants in the mismatch repair (MMR) genes. To date, fragmentation of clinical and genomic data has restricted understanding of national LS ascertainment and outcomes, and precluded evaluation of NICE guidance on testing and management. To address this, via collaboration between researchers, the National Disease Registration Service (NDRS), NHS Genomic Medicine Service Alliances (GMSAs), and NHS Regional Clinical Genetics Services, a comprehensive registry of LS carriers in England has been established. Methods: For comprehensive ascertainment of retrospectively identified MMR pathogenic variant (PV) carriers (diagnosed prior to January 1, 2023), information was retrieved from all clinical genetics services across England, then restructured, amalgamated, and validated via a team of trained experts in NDRS. An online submission portal was established for prospective ascertainment from January 1, 2023. The resulting data, stored in a secure database in NDRS, were used to investigate the demographic and genetic characteristics of the cohort, censored at July 25, 2023. Cancer outcomes were investigated via linkage to the National Cancer Registration Dataset (NCRD). Findings: A total of 11,722 retrospective and 570 prospective data submissions were received, resulting in a comprehensive English National Lynch Syndrome Registry (ENLSR) comprising 9030 unique individuals. The most frequently identified pathogenic MMR genes were Interpretation: The ENLSR represents the first comprehensive national registry of PV carriers in England and one of the largest cohorts of MMR PV carriers worldwide. The establishment of a secure, centralised infrastructure and mechanism for routine registration of newly identified carriers ensures sustainability of the data resource. Funding: This work was funded by the Wellcome Trust, Cancer Research UK and Bowel Cancer UK. The funder of this study had no role in study design, data collection, data analysis, data interpretation, or writing of the report.

Indexed as

DataGenomicsLynch syndromeRegistry

Identifiers

PMID38356732
PMCPMC10864212
OpenAlexW4391627135

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.