Evidence map›Paper›PMID 38355930›Full record

ArticleCommunications chemistry2024

A spectroscopic test suggests that fragment ion structure annotations in MS/MS libraries are frequently incorrect.

Lara van Tetering, Sylvia Spies, Quirine D K Wildeman, Kas J Houthuijs, Rianne E van Outersterp, Jonathan Martens, Ron A Wevers, David S Wishart, Giel Berden, Jos Oomens

Open access · goldAbstract read
In one paragraph

Article in Communications chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
7.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Mass Spectrometry as a Tool for Metabolomics in Cancer.Advances in experimental medicine and biology · 2026
    Review
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  9. Review
  10. Article
  11. Article
  12. Harmonic Scale Factors of Fundamental Transitions for Dispersion-corrected Quantum Chemical Methods.Chemphyschem : a European journal of chemical physics and physical chemistry · 2024
    Article
  13. Article
  14. Article
  15. Studying the Intrinsic Reactivity of Chromanes by Gas-Phase Infrared Spectroscopy.Journal of the American Society for Mass Spectrometry · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Lara van TeteringRadboud University, Institute for Molecules and Materials, FELIX Laboratory, Toernooiveld 7, 6525ED, Nijmegen, The Netherlands.ORCID http://orcid.org/0009-0003-5070-6116
Sylvia SpiesRadboud University, Institute for Molecules and Materials, FELIX Laboratory, Toernooiveld 7, 6525ED, Nijmegen, The Netherlands.ORCID http://orcid.org/0009-0005-8536-4632
Quirine D K WildemanRadboud University, Institute for Molecules and Materials, FELIX Laboratory, Toernooiveld 7, 6525ED, Nijmegen, The Netherlands.ORCID http://orcid.org/0009-0005-3190-3485
Kas J HouthuijsRadboud University, Institute for Molecules and Materials, FELIX Laboratory, Toernooiveld 7, 6525ED, Nijmegen, The Netherlands.ORCID http://orcid.org/0000-0002-8205-2896
Rianne E van OutersterpRadboud University, Institute for Molecules and Materials, FELIX Laboratory, Toernooiveld 7, 6525ED, Nijmegen, The Netherlands.ORCID http://orcid.org/0000-0001-7493-2765
Jonathan MartensRadboud University, Institute for Molecules and Materials, FELIX Laboratory, Toernooiveld 7, 6525ED, Nijmegen, The Netherlands.ORCID http://orcid.org/0000-0001-9537-4117
Ron A WeversDepartment of Laboratory Medicine, Translational Metabolic Laboratory, Radboud University Medical Center, Geert Grooteplein Zuid 10, 6525GA, Nijmegen, The Netherlands.ORCID http://orcid.org/0000-0003-2278-9746
David S WishartDepartments of Computing Science and Biological Sciences, University of Alberta, Edmonton, AB, Canada.ORCID http://orcid.org/0000-0002-3207-2434
Giel BerdenRadboud University, Institute for Molecules and Materials, FELIX Laboratory, Toernooiveld 7, 6525ED, Nijmegen, The Netherlands.ORCID http://orcid.org/0000-0003-1500-922X
Jos OomensRadboud University, Institute for Molecules and Materials, FELIX Laboratory, Toernooiveld 7, 6525ED, Nijmegen, The Netherlands. jos.oomens@ru.nl.ORCID http://orcid.org/0000-0002-2717-1278
Radboud University Nijmegen · NLUniversity of Alberta · CA

Funding

Nederlandse Organisatie voor Wetenschappelijk Onderzoek (Netherlands Organisation for Scientific Research) GWI Roadmap 184.034.022Nederlandse Organisatie voor Wetenschappelijk Onderzoek (Netherlands Organisation for Scientific Research) Rekentijd 2021.055Nederlandse Organisatie voor Wetenschappelijk Onderzoek (Netherlands Organisation for Scientific Research) TKI-LIFT 731.014.419Nederlandse Organisatie voor Wetenschappelijk Onderzoek (Netherlands Organisation for Scientific Research) TTW-OTP 15769
6 · The paper itself

Abstract

Modern untargeted mass spectrometry (MS) analyses quickly detect and resolve thousands of molecular compounds. Although features are readily annotated with a molecular formula in high-resolution small-molecule MS applications, the large majority of them remains unidentified in terms of their full molecular structure. Collision-induced dissociation tandem mass spectrometry (CID-MS

Identifiers

PMID38355930
PMCPMC10867025
OpenAlexW4391822686

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.