Evidence map›Paper›PMID 38355600›Full record

ArticleScientific reports2024

Apolipoprotein L1 (APOL1) renal risk variant-mediated podocyte cytotoxicity depends on African haplotype and surface expression.

Nidhi Gupta, Bridget Waas, Daniel Austin, Ann M De Mazière, Pekka Kujala, Amy D Stockwell, Tianbo Li, Brian L Yaspan, Judith Klumperman, Suzie J Scales

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Kidney international reports · 2026
    Article
  4. Article
  5. Apolipoproteins L involvement in immunity.Journal of human immunity · 2026
    Review
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. Multiethnic prevalence of theClinical kidney journal · 2025
    Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Nidhi GuptaDepartment of Discovery Immunology, Genentech, 1 DNA Way, South San Francisco, CA, 94080, USA.
Bridget WaasDepartment of Discovery Immunology, Genentech, 1 DNA Way, South San Francisco, CA, 94080, USA.
Daniel AustinDepartment of Biochemical and Cellular Pharmacology, Genentech, 1 DNA Way, South San Francisco, CA, 94080, USA.
Ann M De MazièreSection of Cell Biology, Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University, Utrecht, The Netherlands.
Pekka KujalaSection of Cell Biology, Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University, Utrecht, The Netherlands.
Amy D StockwellDepartment of Human Genetics, Genentech, 1 DNA Way, South San Francisco, CA, 94080, USA.
Tianbo LiDepartment of Biochemical and Cellular Pharmacology, Genentech, 1 DNA Way, South San Francisco, CA, 94080, USA.
Brian L YaspanDepartment of Human Genetics, Genentech, 1 DNA Way, South San Francisco, CA, 94080, USA. yaspanb@gene.com.
Judith KlumpermanSection of Cell Biology, Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University, Utrecht, The Netherlands.
Suzie J ScalesDepartment of Discovery Immunology, Genentech, 1 DNA Way, South San Francisco, CA, 94080, USA. suzie_scales@yahoo.com.
Utrecht University · NLATUM (United States) · USGene Therapy Laboratory · FRUniversity of Michigan · USYahoo (United States) · US

Funding

NEMI 184.034.014
6 · The paper itself

Abstract

Homozygous Apolipoprotein L1 (APOL1) variants G1 and G2 cause APOL1-mediated kidney disease, purportedly acting as surface cation channels in podocytes. APOL1-G0 exhibits various single nucleotide polymorphisms, most commonly haplotype E150K, M228I and R255K ("KIK"; the Reference Sequence is "EMR"), whereas variants G1 and G2 are mostly found in a single "African" haplotype background ("EIK"). Several labs reported cytotoxicity with risk variants G1 and G2 in KIK or EIK background haplotypes, but used HEK-293 cells and did not verify equal surface expression. To see if haplotype matters in a more relevant cell type, we induced APOL1-G0, G1 and G2 EIK, KIK and EMR at comparable surface levels in immortalized podocytes. G1 and G2 risk variants (but not G0) caused dose-dependent podocyte death within 48h only in their native African EIK haplotype and correlated with K

Indexed as

PodocytesApolipoprotein L1Genetic VariationHaplotypesHEK293 CellsHumansAPOL1 protein, humanApolipoprotein L1

Identifiers

PMID38355600
PMCPMC10866943
OpenAlexW4391808541

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.