Evidence map›Paper›PMID 38353614›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2024

Cutting Edge: Phagosome-associated Autophagosomes Containing Antigens and Proteasomes Drive TAP-Independent Cross-Presentation.

Debrup Sengupta, Rodrigo Galicia-Pereyra, Patrick Han, Morven Graham, Xinran Liu, Najla Arshad, Peter Cresswell

Open access · greenAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact, top 97% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 0 citations in OpenAlex.

  1. Review
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  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Debrup SenguptaDepartment of Immunobiology, Yale School of Medicine, New Haven, CT.
Rodrigo Galicia-PereyraDepartment of Immunobiology, Yale School of Medicine, New Haven, CT.
Patrick HanDepartment of Immunobiology, Yale School of Medicine, New Haven, CT.ORCID 0000-0002-0370-0729
Morven GrahamDepartment of Cell Biology, Yale School of Medicine, New Haven, CT.ORCID 0000-0002-4375-3198
Xinran LiuDepartment of Cell Biology, Yale School of Medicine, New Haven, CT.ORCID 0000-0002-1586-2151
Najla ArshadDepartment of Immunobiology, Yale School of Medicine, New Haven, CT.ORCID 0000-0001-5553-311X
Peter CresswellDepartment of Immunobiology, Yale School of Medicine, New Haven, CT.ORCID 0000-0003-0540-2351
Yale University · US

Funding

Quality Control of MHC Class I Restricted Antigen ProcessingR01AI097206 · NIAID · YALE UNIVERSITY · PI CRESSWELL, PETER · 2012 to 2020
$4.1M
Mechanisms of antigen cross-presentation by MHC class I moleculesR01AI162820 · NIAID · YALE UNIVERSITY · PI CRESSWELL, PETER · 2021 to 2023
$1.3M
NIAID NIH HHS R01 AI097206NIAID NIH HHS R01 AI162820
6 · The paper itself

Abstract

Activation of naive CD8-positive T lymphocytes is mediated by dendritic cells that cross-present MHC class I (MHC-I)-associated peptides derived from exogenous Ags. The most accepted mechanism involves the translocation of Ags from phagosomes or endolysosomes into the cytosol, where antigenic peptides generated by cytosolic proteasomes are delivered by the transporter associated with Ag processing (TAP) to the endoplasmic reticulum, or an endocytic Ag-loading compartment, where binding to MHC-I occurs. We have described an alternative pathway where cross-presentation is independent of TAP but remains dependent on proteasomes. We provided evidence that active proteasomes found within the lumen of phagosomes and endolysosomal vesicles locally generate antigenic peptides that can be directly loaded onto trafficking MHC-I molecules. However, the mechanism of active proteasome delivery to the endocytic compartments remained unknown. In this study, we demonstrate that phagosome-associated LC3A/B structures deliver proteasomes into subcellular compartments containing exogenous Ags and that autophagy drives TAP-independent, proteasome-dependent cross-presentation.

Indexed as

Cross-PrimingProteasome Endopeptidase ComplexAntigen PresentationAntigensAutophagosomesHistocompatibility Antigens Class IMembrane Transport ProteinsPeptidesPhagosomesAntigensHistocompatibility Antigens Class IMembrane Transport ProteinsPeptidesProteasome Endopeptidase Complex

Identifiers

PMID38353614
PMCPMC10948299
OpenAlexW4391823568

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.