Evidence map›Paper›PMID 38352530›Full record

ArticlebioRxiv : the preprint server for biology2024

Identification and characterization of a temperature sensitive chlorotic soybean mutant.

C Nathan Hancock, Tetandianocee Germany, Priscilla Redd, Jack Timmons, Jeffery Lipford, Samantha Burns, Sergio Alan Cervantes-Perez, Marc Libault, Wenhao Shen, Yong-Qiang Charles An and 3 more

Open access · greenAbstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 1 country.

C Nathan HancockDepartment of Biology and Geology, University of South Carolina Aiken, Aiken, SC.ORCID 0000-0002-0875-8495
Tetandianocee GermanyDepartment of Biology and Geology, University of South Carolina Aiken, Aiken, SC.
Priscilla ReddDepartment of Biology and Geology, University of South Carolina Aiken, Aiken, SC.
Jack TimmonsDepartment of Biology and Geology, University of South Carolina Aiken, Aiken, SC.
Jeffery LipfordDepartment of Biology and Geology, University of South Carolina Aiken, Aiken, SC.
Samantha BurnsDepartment of Biology and Geology, University of South Carolina Aiken, Aiken, SC.
Sergio Alan Cervantes-PerezDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE.
Marc LibaultPlant Science and Technology, University of Missouri, Columbia, MO.ORCID 0000-0001-7419-9129
Wenhao ShenDonald Danforth Plant Science Center, St. Louis, MO.
Yong-Qiang Charles AnUSDA-ARS Plant Genetics Research Unit, Danforth Plant Science Center, Saint Louis, MO.ORCID 0000-0003-4637-5716
Lisa KanizayCenter for Applied Genetic Technology, University of Georgia, Athens, GA.
Melinda YerkaCenter for Applied Genetic Technology, University of Georgia, Athens, GA.ORCID 0000-0001-7210-8684
Wayne A ParrottCenter for Applied Genetic Technology, University of Georgia, Athens, GA.ORCID 0000-0001-7847-1134
University of South Carolina Aiken · USDonald Danforth Plant Science Center · USUniversity of Georgia · USUniversity of Missouri · USUniversity of Nebraska–Lincoln · USUniversity of Nevada, Reno · US

Funding

South Carolina IDeA Networks of Biomedical Research (SC INBRE V)P20GM103499 · NIGMS · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI EDIE C GOLDSMITH · 2012 to 2026
$61.0M
NIGMS NIH HHS P20 GM103499
6 · The paper itself

Abstract

Screening a transposon-mutagenized soybean population led to the discovery of a recessively inherited chlorotic phenotype. This "vir1" phenotype results in smaller stature, weaker stems, and a smaller root system with smaller nodules. Genome sequencing identified 15 candidate genes with mutations likely to result in a loss of function. Amplicon sequencing of a segregating population was then used to narrow the list to a single candidate mutation, a single-base change in

Indexed as

ChloroplastGenome ResequencingMutationOxidoreductaseVirescent

Identifiers

PMID38352530
PMCPMC10862810
OpenAlexW4391515386

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.