Evidence map›Paper›PMID 38352447›Full record

ArticlebioRxiv : the preprint server for biology2024

Global Release of Translational Repression Across

Kelly T Rios, James P McGee, Aswathy Sebastian, Robert L Moritz, Marina Feric, Sabrina Absalon, Kristian E Swearingen, Scott E Lindner

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 4 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Kelly T RiosDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA 16802.ORCID 0000-0001-6662-6426
James P McGeeDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA 16802.ORCID 0000-0003-0225-1172
Aswathy SebastianHuck Institutes of the Life Sciences, Pennsylvania State University, University Park, PA, 16802.ORCID 0000-0003-4936-5564
Robert L MoritzInstitute for Systems Biology, Seattle, WA 98109.ORCID 0000-0002-3216-9447
Marina FericDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA 16802.ORCID 0000-0001-7531-9305
Sabrina AbsalonDepartment of Pharmacology and Toxicology, Indiana University School of Medicine, Indianapolis, IN 46202.ORCID 0000-0003-2468-8156
Kristian E SwearingenInstitute for Systems Biology, Seattle, WA 98109.ORCID 0000-0002-6756-4471
Scott E LindnerDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA 16802.ORCID 0000-0003-1799-3726
Pennsylvania State University · USInstitute for Systems Biology · USIndiana University School of Medicine

Funding

Shortening the development cycle time of Trans Proteomic Pipeline tools with high performance computingR01GM087221 · NIGMS · INSTITUTE FOR SYSTEMS BIOLOGY · PI DEUTSCH, ERIC, MORITZ, ROBERT L · 2010 to 2021
$6.0M
Elucidating the role of TSR glycosylation in Plasmodium parasitesR01AI148489 · NIAID · INSTITUTE FOR SYSTEMS BIOLOGY · PI SWEARINGEN, KRISTIAN EDWARD · 2020 to 2024
$4.2M
Mechanisms Governing Translational Regulation During Plasmodium TransmissionR01AI123341 · NIAID · PENNSYLVANIA STATE UNIVERSITY, THE · PI LINDNER, SCOTT E · 2017 to 2021
$1.9M
Acquisition of Fusion Lumos Orbitrap mass spectrometerS10OD026936 · OD · INSTITUTE FOR SYSTEMS BIOLOGY · PI MORITZ, ROBERT L · 2019 to 2019
$600k
Mechanisms Governing Translational Regulation During Plasmodium TransmissionR56AI123341 · NIAID · PENNSYLVANIA STATE UNIVERSITY, THE · PI LINDNER, SCOTT E · 2022 to 2022
$477k
NIAID NIH HHS R01 AI123341NIAID NIH HHS R01 AI148489NIAID NIH HHS R56 AI123341NIGMS NIH HHS R01 GM087221NIH HHS S10 OD026936
6 · The paper itself

Abstract

Malaria parasites must be able to respond quickly to changes in their environment, including during their transmission between mammalian hosts and mosquito vectors. Therefore, before transmission, female gametocytes proactively produce and translationally repress mRNAs that encode essential proteins that the zygote requires to establish a new infection. This essential regulatory control requires the orthologues of DDX6 (DOZI), LSM14a (CITH), and ALBA proteins to form a translationally repressive complex in female gametocytes that associates with many of the affected mRNAs. However, while the release of translational repression of individual mRNAs has been documented, the details of the global release of translational repression have not. Moreover, the changes in spatial arrangement and composition of the DOZI/CITH/ALBA complex that contribute to translational control are also not known. Therefore, we have conducted the first quantitative, comparative transcriptomics and DIA-MS proteomics of

Indexed as

DIA ProteomicsMalaria TransmissionProximity ProteomicsRNA-seqTranslational Repression

Identifiers

PMID38352447
PMCPMC10862809
OpenAlexW4391554700

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.