Evidence map›Paper›PMID 38351873›Full record

ArticleInfection control and hospital epidemiology2024

Differentiating patients admitted primarily due to coronavirus disease 2019 (COVID-19) from those admitted with incidentally detected severe acute respiratory syndrome corona-virus type 2 (SARS-CoV-2) at hospital admission: A cohort analysis of German hospital records.

Ralf Strobl, Martin Misailovski, Sabine Blaschke, Milena Berens, Andreas Beste, Manuel Krone, Michael Eisenmann, Sina Ebert, Anna Hoehn, Juliane Mees and 11 more

Abstract read
In one paragraph

Article in Infection control and hospital epidemiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Ralf Strobl *Institute for Medical Information Processing, Biometrics and Epidemiology, Faculty of Medicine, LMU Munich, Muenchen, Germany.ORCID 0000-0002-7719-948X
Martin Misailovski *Department of Infection Control and Infectious Diseases, University Medical Center Goettingen, Goettingen, Germany.ORCID 0000-0002-9811-2208
Sabine Blaschke *Emergency Department, University Medical Center Goettingen, Goettingen, Germany.ORCID 0000-0001-8800-7554
Milena BerensDepartment of Infection Control and Infectious Diseases, University Medical Center Goettingen, Goettingen, Germany.
Andreas BesteDepartment of Infection Control and Infectious Diseases, University Medical Center Goettingen, Goettingen, Germany.
Manuel KroneInstitute for Hygiene and Microbiology, University of Wurzburg, Wurzburg, Germany.ORCID 0000-0002-1020-6454
Michael EisenmannInstitute for Hygiene and Microbiology, University of Wurzburg, Wurzburg, Germany.ORCID 0000-0003-2503-9203
Sina EbertInstitute for Hygiene and Microbiology, University of Wurzburg, Wurzburg, Germany.
Anna HoehnInstitute for Hygiene and Microbiology, University of Wurzburg, Wurzburg, Germany.
Juliane MeesInfection Control and Antimicrobial Stewardship Unit, University Hospital Wurzburg, Wurzburg, Germany.ORCID 0009-0000-4383-3107
Martin KaaseDepartment of Infection Control and Infectious Diseases, University Medical Center Goettingen, Goettingen, Germany.ORCID 0000-0003-0144-8571
Dhia J ChackalackalDepartment of Infection Control and Infectious Diseases, University Medical Center Goettingen, Goettingen, Germany.ORCID 0000-0003-4600-9863
Daniela KollerInstitute for Medical Information Processing, Biometrics and Epidemiology, Faculty of Medicine, LMU Munich, Muenchen, Germany.ORCID 0000-0002-3203-7188
Julia ChrampanisDepartment of Infection Control and Infectious Diseases, University Medical Center Goettingen, Goettingen, Germany.
Jana-Michelle KosubDepartment of Infection Control and Infectious Diseases, University Medical Center Goettingen, Goettingen, Germany.
Nikita SrivastavaDepartment of Infection Control and Infectious Diseases, University Medical Center Goettingen, Goettingen, Germany.
Fady AlbashitiMedical Data Integration Center, LMU University Hospital, LMU Munich, Muenchen, Germany.ORCID 0000-0002-0671-152X
Uwe GroßInstitute of Medical Microbiology and Virology, University Medical Center Goettingen, Goettingen, Germany.
Andreas FischerInstitute for Clinical Chemistry, University Medical Center Goettingen, Goettingen, Germany.
Eva Grill *Institute for Medical Information Processing, Biometrics and Epidemiology, Faculty of Medicine, LMU Munich, Muenchen, Germany.ORCID 0000-0002-0273-7984
Simone Scheithauer *Department of Infection Control and Infectious Diseases, University Medical Center Goettingen, Goettingen, Germany.ORCID 0000-0003-0773-4739

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveThe number of hospitalized patients with severe acute respiratory syndrome coronavirus type 2 (SARS-CoV-2) does not differentiate between patients admitted due to coronavirus disease 2019 (COVID-19) (ie, primary cases) and incidental SARS-CoV-2 infection (ie, incidental cases). We developed an adaptable method to distinguish primary cases from incidental cases upon hospital admission.

designRetrospective cohort study.

settingData were obtained from 3 German tertiary-care hospitals. PATIENTS: The study included patients of all ages who tested positive for SARS-CoV-2 by a standard quantitative reverse-transcription polymerase chain reaction (RT-PCR) assay upon admission between January and June 2022.

methodsWe present 2 distinct models: (1) a point-of-care model that can be used shortly after admission based on a limited range of parameters and (2) a more extended point-of-care model based on parameters that are available within the first 24-48 hours after admission. We used regression and tree-based classification models with internal and external validation.

resultsIn total, 1,150 patients were included (mean age, 49.5±28.5 years; 46% female; 40% primary cases). Both point-of-care models showed good discrimination with area under the curve (AUC) values of 0.80 and 0.87, respectively. As main predictors, we used admission diagnosis codes (ICD-10-GM), ward of admission, and for the extended model, we included viral load, need for oxygen, leucocyte count, and C-reactive protein.

conclusionsWe propose 2 predictive algorithms based on routine clinical data that differentiate primary COVID-19 from incidental SARS-CoV-2 infection. These algorithms can provide a precise surveillance tool that can contribute to pandemic preparedness. They can easily be modified to be used in future pandemic, epidemic, and endemic situations all over the world.

Indexed as

COVID-19SARS-CoV-2AdultAgedAged, 80 and overFemaleGermanyHospitalizationHumansIncidental FindingsMaleMiddle AgedRetrospective Studies

Identifiers

PMID38351873
PMCPMC11102825

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.