Evidence map›Paper›PMID 38351308›Full record

ArticleScientific data2024

Chromosome-level genome assembly of the Japanese sawyer beetle Monochamus alternatus.

Yong-Fu Gao, Fang-Yuan Yang, Wei Song, Li-Jun Cao, Jin-Cui Chen, Xiu-Jing Shen, Liang-Jian Qu, Shi-Xiang Zong, Shu-Jun Wei

Open access · goldAbstract readDataset
In one paragraph

Article in Scientific data, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Draft genome sequence ofMicrobiology resource announcements · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Yong-Fu GaoBeijing Key Laboratory for Forest Pest Control, Beijing Forestry University, Beijing, 100083, China.
Fang-Yuan YangInstitute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 1000097, China.ORCID 0000-0002-8435-3326
Wei SongInstitute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 1000097, China.
Li-Jun CaoInstitute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 1000097, China.
Jin-Cui ChenInstitute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 1000097, China.
Xiu-Jing ShenInstitute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 1000097, China.
Liang-Jian QuKey Laboratory of Forest Protection of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing, 100091, China.
Shi-Xiang ZongBeijing Key Laboratory for Forest Pest Control, Beijing Forestry University, Beijing, 100083, China. zongshixiang@bjfu.edu.cn.
Shu-Jun WeiInstitute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 1000097, China. shujun268@163.com.ORCID 0000-0001-7398-0968
Institute of Plant Protection · CNBeijing Forestry University · CNChinese Academy of Forestry · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Japanese sawyer beetle Monochamus alternatus (Coleoptera: Cerambycidae) is a pest in pine forests and acts as a vector for the pine wood nematode Bursaphelenchus xylophilus, which causes the pine wilt disease. We assembled a high-quality genome of M. alternatus at the chromosomal level using Illumina, Nanopore, and Hi-C sequencing technologies. The assembled genome is 767.12 Mb, with a scaffold N50 of 82.0 Mb. All contigs were assembled into ten pseudo-chromosomes. The genome contains 63.95% repeat sequences. We identify 16, 284 protein-coding genes in the genome, of which 11,244 were functionally annotated. The high-quality genome of M. alternatus provides an invaluable resource for the biological, ecological, and genetic study of this beetle and opens new avenues for understanding the transmission of pine wood nematode by insect vectors.

Indexed as

ColeopteraGenome, InsectPinusAnimalsForestsInsect VectorsJapan

Identifiers

PMID38351308
PMCPMC10864374
OpenAlexW4391779596

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.