ArticleScientific data2024
A high-quality genome assembly of the waterlily aphid Rhopalosiphum nymphaeae.
Article in Scientific data, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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Who cites it
12 citing papers in PubMed.
- A chromosome-level genome assembly of the waterlily aphid Rhopalosiphum nymphaeae Linnaeus.Scientific data · 2026Article
- Chromosome-level genome assembly of a citrus and tea insect pest, Aphis aurantii.Scientific data · 2026Article
- Chromosome-level genome assemblies of Nicotiana attenuata (coyote tobacco) and Nicotiana obtusifolia (desert tobacco).Scientific data · 2026Article
- Exploring the Satellitome of the Pest Aphid Acyrthosiphon pisum (Hemiptera, Aphididae): Insights Into Genome Organization and Intraspecies Evolution.Genome biology and evolution · 2025Article
- A chromosome-level genome assembly of the aphid Semiaphis heraclei (Takahashi).Scientific data · 2025Article
- Chromosome-level genome assembly of soybean aphid.Scientific data · 2025Article
- Evaluating long-read assemblers to assemble several aphididae genomes.Briefings in bioinformatics · 2025Article
- Gene expression atlas of the Colorado potato beetle (Leptinotarsa decemlineata).Scientific data · 2025Article
- Characterization, Codon Usage Pattern and Phylogenetic Implications of the Waterlily AphidInternational journal of molecular sciences · 2024Article
- Functional and Numerical Responses ofInsects · 2024Article
- A high-quality genome assembly of the waterlily aphid Rhopalosiphum nymphaeae.Scientific data · 2024Article
- The genome sequence of the Lunar-spotted Pinion,Wellcome open research · 2023Article
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2 authors.
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Abstract
Waterlily aphid, Rhopalosiphum nymphaeae (Linnaeus), is a host-alternating aphid known to feed on both terrestrial and aquatic hosts. It causes damage through direct herbivory and acting as a vector for plant viruses, impacting worldwide Prunus spp. fruits and aquatic plants. Interestingly, R. nymphaeae's ability to thrive in both aquatic and terrestrial conditions sets it apart from other aphids, offering a unique perspective on adaptation. We present the first high-quality R. nymphaeae genome assembly with a size of 324.4 Mb using PacBio long-read sequencing. The resulting assembly is highly contiguous with a contig N50 reached 12.7 Mb. The BUSCO evaluation suggested a 97.5% completeness. The R. nymphaeae genome consists of 16.9% repetitive elements and 16,834 predicted protein-coding genes. Phylogenetic analysis positioned R. nymphaeae within the Aphidini tribe, showing close relations to R. maidis and R. padi. The high-quality reference genome R. nymphaeae provides a unique resource for understanding genome evolution in aphids and paves the foundation for understanding host plant adaptation mechanisms and developing pest control strategies.
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