Evidence map›Paper›PMID 38351133›Full record

ArticleeNeuro2024

Single-Nucleus RNA-Seq Characterizes the Cell Types Along the Neuronal Lineage in the Adult Human Subependymal Zone and Reveals Reduced Oligodendrocyte Progenitor Abundance with Age.

Sofía Puvogel, Astrid Alsema, Hayley F North, Maree J Webster, Cynthia Shannon Weickert, Bart J L Eggen

Open access · goldAbstract read
In one paragraph

Article in eNeuro, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 3 countries.

Sofía PuvogelSection Molecular Neurobiology, Department of Biomedical Sciences of Cells and Systems, University of Groningen, University Medical Center Groningen, Groningen 9700 AD, The Netherlands.ORCID https://orcid.org/0000-0001-8044-3722
Astrid AlsemaSection Molecular Neurobiology, Department of Biomedical Sciences of Cells and Systems, University of Groningen, University Medical Center Groningen, Groningen 9700 AD, The Netherlands.
Hayley F NorthSchizophrenia Research Laboratory, Neuroscience Research Australia, Sydney, New South Wales 2031, Australia.
Maree J WebsterLaboratory of Brain Research, Stanley Medical Research Institute, Rockville 20850, Maryland.
Cynthia Shannon WeickertSchizophrenia Research Laboratory, Neuroscience Research Australia, Sydney, New South Wales 2031, Australia weickerc@upstate.edu.
Bart J L EggenSection Molecular Neurobiology, Department of Biomedical Sciences of Cells and Systems, University of Groningen, University Medical Center Groningen, Groningen 9700 AD, The Netherlands.
University Medical Center Groningen · NLStanley Medical Research Institute · USSUNY Upstate Medical University · USUNSW Sydney · AU

Funding

Neuroinflammation and Neurogenesis in SchizophreniaR01MH126108 · NIMH · UPSTATE MEDICAL UNIVERSITY · PI Cynthia Shannon Weickert · 2022 to 2026
$1.8M
NIMH NIH HHS R01 MH126108
6 · The paper itself

Abstract

The subependymal zone (SEZ), also known as the subventricular zone (SVZ), constitutes a neurogenic niche that persists during postnatal life. In humans, the neurogenic potential of the SEZ declines after the first year of life. However, studies discovering markers of stem and progenitor cells highlight the neurogenic capacity of progenitors in the adult human SEZ, with increased neurogenic activity occurring under pathological conditions. In the present study, the complete cellular niche of the adult human SEZ was characterized by single-nucleus RNA sequencing, and compared between four youth (age 16-22) and four middle-aged adults (age 44-53). We identified 11 cellular clusters including clusters expressing marker genes for neural stem cells (NSCs), neuroblasts, immature neurons, and oligodendrocyte progenitor cells. The relative abundance of NSC and neuroblast clusters did not differ between the two age groups, indicating that the pool of SEZ NSCs does not decline in this age range. The relative abundance of oligodendrocyte progenitors and microglia decreased in middle-age, indicating that the cellular composition of human SEZ is remodeled between youth and adulthood. The expression of genes related to nervous system development was higher across different cell types, including NSCs, in youth as compared with middle-age. These transcriptional changes suggest ongoing central nervous system plasticity in the SEZ in youth, which declined in middle-age.

Indexed as

Neural Stem CellsOligodendrocyte Precursor CellsAdolescentAdultHumansLateral VentriclesMiddle AgedNeurogenesisNeuronsRNA-SeqYoung AdultneurogenesisNSCsSEZsnRNAseqSVZ

Identifiers

PMID38351133
PMCPMC10913050
OpenAlexW4391773536

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.