Evidence map›Paper›PMID 38350872›Full record

ArticleBMC genomics2024

Insights from Melipona bicolor hybrid genome assembly: a stingless bee genome with chromosome-level scaffold.

Natalia de Souza Araujo, Fernando Ogihara, Pedro Mariano Martins, Maria Cristina Arias

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
9.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Natalia de Souza AraujoEvolutionary Biology & Ecology, Université Libre de Bruxelles - ULB, Brussels, Belgium. natalia.de.souza.araujo@ulb.be.ORCID http://orcid.org/0000-0002-0074-6844
Fernando OgiharaLaboratory of Genetics and Evolution of Bees, Bioscience Institute, Universidade de São Paulo - USP, São Paulo, Brazil.ORCID http://orcid.org/0000-0003-2495-889X
Pedro Mariano MartinsGene Expression and Evolution Laboratory, Bioscience Institute, Universidade de São Paulo - USP, São Paulo, Brazil.ORCID http://orcid.org/0000-0002-0070-6404
Maria Cristina AriasLaboratory of Genetics and Evolution of Bees, Bioscience Institute, Universidade de São Paulo - USP, São Paulo, Brazil.ORCID http://orcid.org/0000-0003-1477-101X
Universidade de São Paulo · BRUniversité Libre de Bruxelles · BE

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 307356/2019-1Fonds De La Recherche Scientifique - FNRS 40005980Fundação de Amparo à Pesquisa do Estado de São Paulo 2019/23186-9; 2016/24669-5
6 · The paper itself

Abstract

backgroundThe highly eusocial stingless bees are crucial pollinators of native and agricultural ecosystems. Nevertheless, genomic studies within this bee tribe remain scarce. We present the genome assembly of the stingless bee Melipona bicolor. This bee is a remarkable exception to the typical single-queen colony structure, since in this species, multiple queens may coexist and share reproductive duties, resulting in genetically diverse colonies with weak kinship connections. As the only known genuinely polygynous bee, M. bicolor's genome provides a valuable resource for investigating sociality beyond kin selection.

resultsThe genome was assembled employing a hybrid approach combining short and long reads, resulting in 241 contigs spanning 259 Mb (N50 of 6.2 Mb and 97.5% complete BUSCOs). Comparative analyses shed light on some evolutionary aspects of stingless bee genomics, including multiple chromosomal rearrangements in Melipona. Additionally, we explored the evolution of venom genes in M. bicolor and other stingless bees, revealing that, apart from two genes, the conserved repertoire of venom components remains under purifying selection in this clade.

conclusionThis study advances our understanding of stingless bee genomics, contributing to the conservation efforts of these vital pollinators and offering insights into the evolutionary mechanisms driving their unique adaptations.

Indexed as

EcosystemSocial BehaviorAnimalsBeesChromosomesReproductionEusocial beesGenome assemblyMeliponiniPolygynyVenom genes

Identifiers

PMID38350872
PMCPMC10863234
OpenAlexW4391781761

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.