Evidence map›Paper›PMID 38349732›Full record

ArticleJournal of medical Internet research2024

Identifying Functional Status Impairment in People Living With Dementia Through Natural Language Processing of Clinical Documents: Cross-Sectional Study.

John Laurentiev, Dae Hyun Kim, Mufaddal Mahesri, Kuan-Yuan Wang, Lily G Bessette, Cassandra York, Heidi Zakoul, Su Been Lee, Li Zhou, Kueiyu Joshua Lin

Abstract read
In one paragraph

Article in Journal of medical Internet research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

John Laurentiev *Department of Medicine, Brigham and Women's Hospital, Boston, MA, United States.ORCID 0000-0001-9418-424X
Dae Hyun Kim *Department of Medicine, Brigham and Women's Hospital, Boston, MA, United States.ORCID 0000-0001-7290-6838
Mufaddal MahesriDepartment of Medicine, Brigham and Women's Hospital, Boston, MA, United States.ORCID 0000-0002-6684-2337
Kuan-Yuan WangNational Cheng Kung University Hospital, Tainan, Taiwan.ORCID 0000-0002-5004-2159
Lily G BessetteDepartment of Medicine, Brigham and Women's Hospital, Boston, MA, United States.ORCID 0000-0003-1088-8579
Cassandra YorkDepartment of Medicine, Brigham and Women's Hospital, Boston, MA, United States.ORCID 0000-0001-5940-0744
Heidi ZakoulDepartment of Medicine, Brigham and Women's Hospital, Boston, MA, United States.ORCID 0009-0008-3022-9013
Su Been LeeDepartment of Medicine, Brigham and Women's Hospital, Boston, MA, United States.ORCID 0000-0002-3437-097X
Li Zhou *Department of Medicine, Brigham and Women's Hospital, Boston, MA, United States.ORCID 0000-0003-3874-4833
Kueiyu Joshua Lin *Department of Medicine, Brigham and Women's Hospital, Boston, MA, United States.ORCID 0000-0003-4564-3715

Funding

Developing scalable algorithms to incorporate unstructured electronic health records for causal inference based on real-world dataR01LM013204 · NLM · BRIGHAM AND WOMEN'S HOSPITAL · PI LIN, JOSHUA K · 2020 to 2024
$2.7M
Developing dynamic prognostic and risk-stratification models for informing prescribing decisions in older adults with Coronavirus Disease 2019RF1AG063381 · NIA · BRIGHAM AND WOMEN'S HOSPITAL · PI LIN, JOSHUA K · 2019 to 2021
$2.7M
NIA NIH HHS RF1 AG063381NLM NIH HHS R01 LM013204
6 · The paper itself

Abstract

backgroundAssessment of activities of daily living (ADLs) and instrumental ADLs (iADLs) is key to determining the severity of dementia and care needs among older adults. However, such information is often only documented in free-text clinical notes within the electronic health record and can be challenging to find.

objectiveThis study aims to develop and validate machine learning models to determine the status of ADL and iADL impairments based on clinical notes.

methodsThis cross-sectional study leveraged electronic health record clinical notes from Mass General Brigham's Research Patient Data Repository linked with Medicare fee-for-service claims data from 2007 to 2017 to identify individuals aged 65 years or older with at least 1 diagnosis of dementia. Notes for encounters both 180 days before and after the first date of dementia diagnosis were randomly sampled. Models were trained and validated using note sentences filtered by expert-curated keywords (filtered cohort) and further evaluated using unfiltered sentences (unfiltered cohort). The model's performance was compared using area under the receiver operating characteristic curve and area under the precision-recall curve (AUPRC).

resultsThe study included 10,000 key-term-filtered sentences representing 441 people (n=283, 64.2% women; mean age 82.7, SD 7.9 years) and 1000 unfiltered sentences representing 80 people (n=56, 70% women; mean age 82.8, SD 7.5 years). Area under the receiver operating characteristic curve was high for the best-performing ADL and iADL models on both cohorts (>0.97). For ADL impairment identification, the random forest model achieved the best AUPRC (0.89, 95% CI 0.86-0.91) on the filtered cohort; the support vector machine model achieved the highest AUPRC (0.82, 95% CI 0.75-0.89) for the unfiltered cohort. For iADL impairment, the Bio+Clinical bidirectional encoder representations from transformers (BERT) model had the highest AUPRC (filtered: 0.76, 95% CI 0.68-0.82; unfiltered: 0.58, 95% CI 0.001-1.0). Compared with a keyword-search approach on the unfiltered cohort, machine learning reduced false-positive rates from 4.5% to 0.2% for ADL and 1.8% to 0.1% for iADL.

conclusionsIn this study, we demonstrated the ability of machine learning models to accurately identify ADL and iADL impairment based on free-text clinical notes, which could be useful in determining the severity of dementia.

Indexed as

DementiaNatural Language ProcessingActivities of Daily LivingAgedAged, 80 and overCross-Sectional StudiesFemaleFunctional StatusHumansMaleMedicareUnited Statesactivities of daily livingADLsclinical notedementiaEHRelectronic health recordfunctional impairmentiADLsinstrumental activities of daily livingmachine learningnatural language processingNLP

Identifiers

PMID38349732
PMCPMC10900085

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.