Evidence map›Paper›PMID 38348449›Full record

ArticleNature catalysis2023

Coupled catalytic states and the role of metal coordination in Cas9.

Anuska Das, Jay Rai, Mitchell O Roth, Yuerong Shu, Megan L Medina, Mackenzie R Barakat, Hong Li

Abstract read
In one paragraph

Article in Nature catalysis, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. A Cryptic Binding Pocket Regulates the Metal-Dependent Activity of Cas9.bioRxiv : the preprint server for biology · 2025
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Role of Divalent Cations in Infections in Host-Pathogen Interaction.International journal of molecular sciences · 2024
    Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Anuska DasInstitute of Molecular Biophysics, Florida State University, Tallahassee, FL, USA.
Jay RaiInstitute of Molecular Biophysics, Florida State University, Tallahassee, FL, USA.
Mitchell O RothInstitute of Molecular Biophysics, Florida State University, Tallahassee, FL, USA.
Yuerong ShuInstitute of Molecular Biophysics, Florida State University, Tallahassee, FL, USA.
Megan L MedinaDepartment of Chemistry and Biochemistry, Florida State University, Tallahassee, FL, USA.
Mackenzie R BarakatInstitute of Molecular Biophysics, Florida State University, Tallahassee, FL, USA.
Hong LiInstitute of Molecular Biophysics, Florida State University, Tallahassee, FL, USA.ORCID 0000-0003-2046-9861

Funding

The Southeastern Consortium for Microscopy of MacroMolecular MachinesU24GM116788 · NIGMS · FLORIDA STATE UNIVERSITY · PI AGBANDJE-MCKENNA, MAVIS, BULLITT, ESTHER · 2016 to 2020
$4.6M
Structures of RNA Processing and Silencing Enzymes in ProkaryotesR01GM099604 · NIGMS · FLORIDA STATE UNIVERSITY · PI LI, HONG · 2012 to 2023
$3.3M
Purchase of a FEI Titan Krios for 3-D EMS10RR025080 · NCRR · FLORIDA STATE UNIVERSITY · PI TAYLOR, KENNETH ALLEN · 2008 to 2008
$2.0M
Mechanisms and Applications of RNA-mediated Enzymes in Translation and ImmunityR35GM152081 · NIGMS · VAN ANDEL RESEARCH INSTITUTE · PI Hong Li · 2024 to 2026
$1.8M
CryoEM Equipment Enhancements for Florida State UniversityS10RR024564 · NCRR · FLORIDA STATE UNIVERSITY · PI TAYLOR, KENNETH ALLEN · 2008 to 2008
$178k
NCRR NIH HHS S10 RR024564NCRR NIH HHS S10 RR025080NIGMS NIH HHS R01 GM099604NIGMS NIH HHS R35 GM152081NIGMS NIH HHS U24 GM116788
6 · The paper itself

Abstract

Controlling the activity of the CRISPR-Cas9 system is essential to its safe adoption for clinical and research applications. Although the conformational dynamics of Cas9 are known to control its enzymatic activity, details of how Cas9 influences the catalytic processes at both nuclease domains remain elusive. Here we report five cryo-electron microscopy structures of the active

Identifiers

PMID38348449
PMCPMC10861241

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.