Evidence map›Paper›PMID 38346989›Full record

ArticleScientific reports2024

Real-time study of spatio-temporal dynamics (4D) of physiological activities in alive biological specimens with different FOVs and resolutions simultaneously.

Aiswarya K S, Sohela Sarkar, Smitha Vishnu, Rinsa S R, Simran Negi, Nikhil Dev Narendradev, Rishica Harish Arora, Sreelakshmi Sanam, Anu P V, Rahul Sharma and 4 more

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Aiswarya K SSchool of Physics (SoP), Indian Institute of Science Education and Research Thiruvananthapuram (IISER TVM), Thiruvananthapuram, Kerala, 695551, India.
Sohela Sarkar *School of Biology (SoB), Indian Institute of Science Education and Research Thiruvananthapuram (IISER TVM), Thiruvananthapuram, Kerala, 695551, India.
Smitha Vishnu *School of Biology (SoB), Indian Institute of Science Education and Research Thiruvananthapuram (IISER TVM), Thiruvananthapuram, Kerala, 695551, India.
Rinsa S RSchool of Physics (SoP), Indian Institute of Science Education and Research Thiruvananthapuram (IISER TVM), Thiruvananthapuram, Kerala, 695551, India.
Simran NegiSchool of Biology (SoB), Indian Institute of Science Education and Research Thiruvananthapuram (IISER TVM), Thiruvananthapuram, Kerala, 695551, India.
Nikhil Dev NarendradevSchool of Biology (SoB), Indian Institute of Science Education and Research Thiruvananthapuram (IISER TVM), Thiruvananthapuram, Kerala, 695551, India.
Rishica Harish AroraSchool of Physics (SoP), Indian Institute of Science Education and Research Thiruvananthapuram (IISER TVM), Thiruvananthapuram, Kerala, 695551, India.
Sreelakshmi SanamSchool of Biology (SoB), Indian Institute of Science Education and Research Thiruvananthapuram (IISER TVM), Thiruvananthapuram, Kerala, 695551, India.
Anu P VSchool of Biology (SoB), Indian Institute of Science Education and Research Thiruvananthapuram (IISER TVM), Thiruvananthapuram, Kerala, 695551, India.
Rahul SharmaSchool of Biology (SoB), Indian Institute of Science Education and Research Thiruvananthapuram (IISER TVM), Thiruvananthapuram, Kerala, 695551, India.
Satish KhuranaSchool of Biology (SoB), Indian Institute of Science Education and Research Thiruvananthapuram (IISER TVM), Thiruvananthapuram, Kerala, 695551, India.
Jishy VargheseSchool of Biology (SoB), Indian Institute of Science Education and Research Thiruvananthapuram (IISER TVM), Thiruvananthapuram, Kerala, 695551, India.
Srinivasa Murty SrinivasulaSchool of Biology (SoB), Indian Institute of Science Education and Research Thiruvananthapuram (IISER TVM), Thiruvananthapuram, Kerala, 695551, India.
Mayanglambam Suheshkumar SinghSchool of Physics (SoP), Indian Institute of Science Education and Research Thiruvananthapuram (IISER TVM), Thiruvananthapuram, Kerala, 695551, India. suhesh.kumar@iisertvm.ac.in.

Funding

Department of Biotechnology, Ministry of Science and Technology, India BT/PR30005/MED/32/657/2018Prime Minister's Research Fellowship (PMRF) scheme, Government of India PMRF ID : 0801999
6 · The paper itself

Abstract

This article reports the development of a microscopy imaging system that gives feasibility for studying spatio-temporal dynamics of physiological activities of alive biological specimens (over entire volume not only for a particular section, i.e., in 4D). The imaging technology facilitates to obtain two image frames of a section of the larger specimen ([Formula: see text]) with different FOVs at different resolutions or magnifications simultaneously in real-time (in addition to recovery of 3D (volume) information). Again, this imaging system addresses the longstanding challenges of housing multiple light sources (6 at the maximum till date) in microscopy (in general) and light sheet fluorescence microscopy (LSFM) (in particular), by using a tuneable pulsed laser source (with an operating wavelength in the range [Formula: see text]-670 nm) in contrast to the conventional CW laser source being adopted for inducing photo-excitation of tagged fluorophores. In the present study, we employ four wavelengths ([Formula: see text] 488 nm, 585 nm, 590 nm, and 594 nm). Our study also demonstrates quantitative characterization of spatio-temporal dynamics (velocity-both amplitude and direction) of organelles (mitochondria) and their mutual correlationships. Mitochondria close to the nucleus (or in clustered cells) are observed to possess a lower degree of freedom in comparison to that at the cellular periphery (or isolated cells). In addition, the study demonstrates real-time observation and recording of the development and growth of all tracheal branches during the entire period ([Formula: see text] min) of embryonic development (Drosophila). The experimental results-with experiments being conducted in various and diversified biological specimens (Drosophila melanogaster, mouse embryo, and HeLa cells)-demonstrate that the study is of great scientific impact both from the aspects of technology and biological sciences.

Indexed as

DrosophilaDrosophila melanogasterAnimalsHeLa CellsHumansMiceMicroscopy, FluorescenceTime and Motion Studies

Identifiers

PMID38346989
PMCPMC10861542

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