Evidence map›Paper›PMID 38345432›Full record

ArticleThe Plant cell2024

The Myb73-GDPD2-GA2ox1 transcriptional regulatory module confers phosphate deficiency tolerance in soybean.

Dandan Hu, Ruifan Cui, Ke Wang, Yuming Yang, Ruiyang Wang, Hongqing Zhu, Mengshi He, Yukun Fan, Le Wang, Li Wang and 12 more

Open access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
24.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 41 citations in OpenAlex.

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  8. BnaMYB73, aPlants (Basel, Switzerland) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 6 institutions in 1 country.

Dandan HuCollaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.ORCID 0000-0001-7204-9602
Ruifan CuiCollaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.ORCID 0000-0002-4982-6554
Ke WangCollaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.ORCID 0000-0002-8849-7589
Yuming YangCollaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.ORCID 0000-0003-4330-9174
Ruiyang WangCollaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.ORCID 0000-0002-6584-5114
Hongqing ZhuCollaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.ORCID 0000-0003-2358-7871
Mengshi HeCollaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.ORCID 0009-0009-0654-1135
Yukun FanCollaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.ORCID 0000-0001-8150-569X
Le WangState Key Laboratory of Black Soils Conservation and Utilization, Key Laboratory of Soybean Molecular Design Breeding, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin 150081, China.ORCID 0009-0000-0940-8262
Li WangNational Center for Soybean Improvement, National Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China.ORCID 0000-0001-8326-4199
Shanshan ChuCollaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.ORCID 0000-0002-9778-1784
Jinyu ZhangCollaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.ORCID 0000-0002-7986-1844
Shanshan ZhangCollaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.ORCID 0000-0001-7458-7447
Yifei YangCollaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.ORCID 0000-0001-9809-1534
Xuhao ZhaiCollaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.ORCID 0000-0002-4925-2714
Haiyan LüCollaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.ORCID 0000-0001-9470-5965
Dandan ZhangState Key Laboratory of Agricultural Microbiology, Center of Integrative Biology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China.ORCID 0009-0009-3066-7758
Jinshe WangZhengzhou National Subcenter for Soybean Improvement, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China.ORCID 0009-0002-9189-067X
Fanjiang KongSchool of Life Sciences, Guangzhou University, Guangzhou 510006, China.ORCID 0000-0001-7138-1478
Deyue YuNational Center for Soybean Improvement, National Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China.ORCID 0000-0001-7263-2750
Hengyou ZhangState Key Laboratory of Black Soils Conservation and Utilization, Key Laboratory of Soybean Molecular Design Breeding, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin 150081, China.ORCID 0000-0003-4103-8980
Dan ZhangCollaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.ORCID 0000-0001-6119-9533
Henan Agricultural University · CNNanjing Agricultural University · CNHuazhong Agricultural University · CNChinese Academy of Sciences · CNGuangzhou University · CNHenan Academy of Agricultural Sciences · CN

Funding

Henan Fine Variety Joint Tackling Key Problems Project 2022010304Innovation Team Project of Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences 2022CXTD03Major National Science and Technology Projects during the 14th Five Year Plan period 2023ZD04069Major Science and Technology Project of Henan Province 221100110300National Natural Science Foundation of China 32072088Natural Science Foundation of Heilongjiang Province JQ2022C005
6 · The paper itself

Abstract

Phosphorus is indispensable in agricultural production. An increasing food supply requires more efficient use of phosphate due to limited phosphate resources. However, how crops regulate phosphate efficiency remains largely unknown. Here, we identified a major quantitative trait locus, qPE19, that controls 7 low-phosphate (LP)-related traits in soybean (Glycine max) through linkage mapping and genome-wide association studies. We identified the gene responsible for qPE19 as GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE2 (GmGDPD2), and haplotype 5 represents the optimal allele favoring LP tolerance. Overexpression of GmGDPD2 significantly affects hormone signaling and improves root architecture, phosphate efficiency and yield-related traits; conversely, CRISPR/Cas9-edited plants show decreases in these traits. GmMyb73 negatively regulates GmGDPD2 by directly binding to its promoter; thus, GmMyb73 negatively regulates LP tolerance. GmGDPD2 physically interacts with GA 2-oxidase 1 (GmGA2ox1) in the plasma membrane, and overexpressing GmGA2ox1 enhances LP-associated traits, similar to GmGDPD2 overexpression. Analysis of double mutants for GmGDPD2 and GmGA2ox1 demonstrated that GmGDPD2 regulates LP tolerance likely by influencing auxin and gibberellin dose-associated cell division in the root. These results reveal a regulatory module that plays a major role in regulating LP tolerance in soybeans and is expected to be utilized to develop phosphate-efficient varieties to enhance soybean production, particularly in phosphate-deficient soils.

Indexed as

Gene Expression Regulation, PlantGlycine maxPhosphatesPlant ProteinsGenome-Wide Association StudyPlants, Genetically ModifiedQuantitative Trait LociTranscription FactorsPhosphatesPlant ProteinsTranscription Factors

Identifiers

PMID38345432
PMCPMC11132883
OpenAlexW4391755231

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.