Evidence map›Paper›PMID 38345235›Full record

ArticleJournal of visualized experiments : JoVE2024

An Acetyl-Click Chemistry Assay to Measure Histone Acetyltransferase 1 Acetylation.

Shreenidhi Rajkumar, Danielle Dixon, Andrew M Lipchik, Joshua J Gruber

Open access · greenAbstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 99% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Shreenidhi RajkumarDepartments of Internal Medicine and the Green Center for Reproductive Biology Sciences, University of Texas Southwestern Medical Center.
Danielle DixonDepartments of Internal Medicine and the Green Center for Reproductive Biology Sciences, University of Texas Southwestern Medical Center.
Andrew M LipchikDepartment of Pharmaceutical Sciences, Eugene Applebaum College of Pharmacy and Health Sciences, Wayne State University.
Joshua J GruberDepartments of Internal Medicine and the Green Center for Reproductive Biology Sciences, University of Texas Southwestern Medical Center; Joshua.Gruber@utsouthwestern.edu.
The University of Texas Southwestern Medical Center · USEugene Applebaum College of Pharmacy and Health Sciences · US

Funding

Metabolite sensing through the HAT1 acetyltransferase as an anti-cancer targetK08CA245024 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI GRUBER, JOSHUA JAMES · 2020 to 2024
$820k
NCI NIH HHS K08 CA245024
6 · The paper itself

Abstract

HAT1, also known as Histone acetyltransferase 1, plays a crucial role in chromatin synthesis by stabilizing and acetylating nascent H4 before nucleosome assembly. It is required for tumor growth in various systems, making it a potential target for cancer treatment. To facilitate the identification of compounds that can inhibit HAT1 enzymatic activity, we have devised an acetyl-click assay for rapid screening. In this simple assay, we employ recombinant HAT1/Rbap46, which is purified from activated human cells. The method utilizes the acetyl-CoA analog 4-pentynoyl-CoA (4P) in a click-chemistry approach. This involves the enzymatic transfer of an alkyne handle through a HAT1-dependent acylation reaction to a biotinylated H4 N-terminal peptide. The captured peptide is then immobilized on neutravidin plates, followed by click-chemistry functionalization with biotin-azide. Subsequently, streptavidin-peroxidase recruitment is employed to oxidize amplex red, resulting in a quantitative fluorescent output. By introducing chemical inhibitors during the acylation reaction, we can quantify enzymatic inhibition based on a reduction of the fluorescence signal. Importantly, this reaction is scalable, allowing for high throughput screening of potential inhibitors for HAT1 enzymatic activity.

Indexed as

Click ChemistryHistonesAcetylationHistone AcetyltransferasesHumansPeptidesHistone AcetyltransferasesHistonesPeptides

Identifiers

PMID38345235
PMCPMC11103210
OpenAlexW4391270000

What OpenQuestion holds

Textmetadata
LicenceTDM
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.