Evidence map›Paper›PMID 38342599›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2024

Deciphering Membrane-Protein Interactions and High-Throughput Antigen Identification with Cell Doublets.

Yuqian Wang, Zhe Wang, Juan Yang, Xiaobo Lei, Yisu Liu, Luke Frankiw, Jianwei Wang, Guideng Li

Abstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yuqian WangNational Key Laboratory of Immunity and Inflammation, Suzhou Institute of Systems Medicine, Chinese Academy of Medical Sciences & Peking Union Medical College, Suzhou, Jiangsu, 215123, China.
Zhe WangNational Key Laboratory of Immunity and Inflammation, Suzhou Institute of Systems Medicine, Chinese Academy of Medical Sciences & Peking Union Medical College, Suzhou, Jiangsu, 215123, China.
Juan YangNational Key Laboratory of Immunity and Inflammation, Suzhou Institute of Systems Medicine, Chinese Academy of Medical Sciences & Peking Union Medical College, Suzhou, Jiangsu, 215123, China.
Xiaobo LeiNHC Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, 100730, China.
Yisu LiuNational Key Laboratory of Immunity and Inflammation, Suzhou Institute of Systems Medicine, Chinese Academy of Medical Sciences & Peking Union Medical College, Suzhou, Jiangsu, 215123, China.
Luke FrankiwDepartment of Pediatrics, Boston Children's Hospital, Boston, MA, 02115, USA.
Jianwei WangNHC Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, 100730, China.
Guideng LiNational Key Laboratory of Immunity and Inflammation, Suzhou Institute of Systems Medicine, Chinese Academy of Medical Sciences & Peking Union Medical College, Suzhou, Jiangsu, 215123, China.ORCID 0000-0003-0840-7262

Funding

CAMS Innovation Fund for Medical Sciences 2021-I2M-1-047CAMS Innovation Fund for Medical Sciences 2021-I2M-1-061CAMS Innovation Fund for Medical Sciences 2022-I2M-2-004CAMS Innovation Fund for Medical Sciences 2023-I2M-QJ-019CAMS Innovation Fund for Medical Sciences (CIFMS) 2022-I2M-1-021Gusu Innovation and Entrepreneurship Talent Program ZXL2022503National Natural Science Foundation of China 32270994National Natural Science Foundation of China 81972875Natural Science Foundation Outstanding Youth Fund of Jiangsu Province BK20211505NCTIB Fund for R&D Platform for Cell and Gene TherapyNon-profit Central Research Institute Fund of Chinese Academy of Medical Sciences 2019PT310028Non-profit Central Research Institute Fund of Chinese Academy of Medical Sciences 2021-RC310-014Science Fund for Creative Research Groups of the National Natural Science Foundation of China 82221004Suzhou Municipal Key Laboratory SZS2023005
6 · The paper itself

Abstract

Deciphering cellular interactions is essential to both understand the mechanisms underlying a broad range of human diseases, but also to manipulate therapies targeting these diseases. Here, the formation of cell doublets resulting from specific membrane ligand-receptor interactions is discovered. Based on this phenomenon, the study developed DoubletSeeker, a novel high-throughput method for the reliable identification of ligand-receptor interactions. The study shows that DoubletSeeker can accurately identify T cell receptor (TCR)-antigen interactions with high sensitivity and specificity. Notably, DoubletSeeker effectively captured paired TCR-peptide major histocompatibility complex (pMHC) information during a highly complex library-on-library screening and successfully identified three mutant TCRs that specifically recognize the MART-1 epitope. In turn, DoubletSeeker can act as an antigen discovery platform that allows for the development of novel immunotherapy targets, making it valuable for investigating fundamental tumor immunology.

Indexed as

AntigensReceptors, Antigen, T-CellHumansLigandsMajor Histocompatibility ComplexPeptidesAntigensLigandsPeptidesReceptors, Antigen, T-Celldoubletsmembrane‐protein interactionpMHCT cell antigen discoveryTCR

Identifiers

PMID38342599
PMCPMC10987144

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.