Evidence map›Paper›PMID 38341945›Full record

ArticleComputerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society2024

A transformer-based pyramid network for coronary calcified plaque segmentation in intravascular optical coherence tomography images.

Yiqing Liu, Farhad R Nezami, Elazer R Edelman

Open access · greenAbstract read
In one paragraph

Article in Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
10.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 1 country.

Yiqing LiuInstitute for Medical Engineering and Science, Massachusetts Institute of Technology, Cambridge, MA 02139, USA. Electronic address: lyiqing@mit.edu.
Farhad R NezamiInstitute for Medical Engineering and Science, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Division of Cardiac Surgery, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA.
Elazer R EdelmanInstitute for Medical Engineering and Science, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Cardiovascular Division, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA.
Brigham and Women's Hospital · USHarvard University · USMassachusetts Institute of Technology · US

Funding

Personalized lesion modification optimizes atherosclerosis interventionR01HL161069 · NHLBI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI EDELMAN, ELAZER R · 2022 to 2025
$2.8M
NHLBI NIH HHS R01 HL161069
6 · The paper itself

Abstract

Characterizing coronary calcified plaque (CCP) provides essential insight into diagnosis and treatment of atherosclerosis. Intravascular optical coherence tomography (OCT) offers significant advantages for detecting CCP and even automated segmentation with recent advances in deep learning techniques. Most of current methods have achieved promising results by adopting existing convolution neural networks (CNNs) in computer vision domain. However, their performance can be detrimentally affected by unseen plaque patterns and artifacts due to inherent limitation of CNNs in contextual reasoning. To overcome this obstacle, we proposed a Transformer-based pyramid network called AFS-TPNet for robust, end-to-end segmentation of CCP from OCT images. Its encoder is built upon CSWin Transformer architecture, allowing for better perceptual understanding of calcified arteries at a higher semantic level. Specifically, an augmented feature split (AFS) module and residual convolutional position encoding (RCPE) mechanism are designed to effectively enhance the capability of Transformer in capturing both fine-grained features and global contexts. Extensive experiments showed that AFS-TPNet trained using Lovasz Loss achieved superior performance in segmentation CCP under various contexts, surpassing prior state-of-the-art CNN and Transformer architectures by more than 6.58% intersection over union (IoU) score. The application of this promising method to extract CCP features is expected to enhance clinical intervention and translational research using OCT.

Indexed as

HeartTomography, Optical CoherenceArteriesArtifactsNeural Networks, ComputerCoronary calcified plaque segmentationIntravascular OCTTransformer

Identifiers

PMID38341945
PMCPMC11225546
OpenAlexW4391691180

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.