Evidence map›Paper›PMID 38341832›Full record

ArticlePlant cell reports2024

Identification of adult resistant genes to stripe rust in wheat from southwestern China based on GWAS and WGCNA analysis.

Liang Qiao, Xue Gao, Zhiqiang Jia, Xingchen Liu, Huiyutang Wang, Yixi Kong, Peng Qin, Baoju Yang

Abstract read
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In one paragraph

Article in Plant cell reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
9.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 13 citations in OpenAlex.

  1. Unlocking the potential of spring wheat genetic resources: uncovering resistance sources against leaf rust and yellow rust.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
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  2. Article
  3. Review
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  5. Article
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  8. Genome-wide association mapping for the identification of stripe rust resistance loci in US hard winter wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  9. Article
  10. Identification of candidate genes for adult plant stripe rust resistance transferred from Aegilops ventricosa 2NTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  11. Article
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Liang QiaoCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, 650201, China.
Xue GaoCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, 650201, China.
Zhiqiang JiaCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, 650201, China.
Xingchen LiuCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, 650201, China.
Huiyutang WangCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, 650201, China.
Yixi KongCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, 650201, China.
Peng QinCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, 650201, China.
Baoju YangCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, 650201, China. yangbaoju@nwsuaf.edu.cn.ORCID http://orcid.org/0009-0006-9764-8066
Yunnan Agricultural University · CN

Funding

National Natural Science Foundation of China 32160481Ten Thousand Talent Plans for Young Top-notch Talents of Yunnan Province 2018-79
6 · The paper itself

Abstract

key messageIn this study, genome-wide association studies combined with transcriptome data analysis were utilized to reveal potential candidate genes for stripe rust resistance in wheat, providing a basis for screening wheat varieties for stripe rust resistance. Wheat stripe rust, which is caused by the wheat stripe rust fungus (Puccinia striiformis f. sp. tritici, Pst) is one of the world's most devastating diseases of wheat. Genetic resistance is the most effective strategy for controlling diseases. Although wheat stripe rust resistance genes have been identified to date, only a few of them confer strong and broad-spectrum resistance. Here, the resistance of 335 wheat germplasm resources (mainly wheat landraces) from southwestern China to wheat stripe rust was evaluated at the adult stage. Combined genome-wide association study (GWAS) and weighted gene co-expression network analysis (WGCNA) based on RNA sequencing from stripe rust resistant accession Y0337 and susceptible accession Y0402, five candidate resistance genes to wheat stripe rust (TraesCS1B02G170200, TraesCS2D02G181000, TraesCS4B02G117200, TraesCS6A02G189300, and TraesCS3A02G122300) were identified. The transcription level analyses showed that these five genes were significantly differentially expressed between resistant and susceptible accessions post inoculation with Pst at different times. These candidate genes could be experimentally transformed to validate and manipulate fungal resistance, which is beneficial for the development of the wheat cultivars resistant to stripe rust.

Indexed as

BasidiomycotaGenome-Wide Association StudyChinaDisease ResistancePlant DiseasesTriticumGWASResistance geneRNA sequencingStripe rustWGCNA

Identifiers

PMID38341832
OpenAlexW4391734881

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.