Evidence map›Paper›PMID 38339032›Full record

ArticleInternational journal of molecular sciences2024

Genome-Wide Association Study and Prediction of Tassel Weight of Tropical Maize Germplasm in Multi-Parent Population.

Meichen Liu, Yudong Zhang, Ranjan K Shaw, Xingjie Zhang, Jinfeng Li, Linzhuo Li, Shaoxiong Li, Muhammad Adnan, Fuyan Jiang, Yaqi Bi and 2 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Genome-Wide Association Study of Body Conformation Traits in Tashi Goats (Animals : an open access journal from MDPI · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Meichen LiuSchool of Agriculture, Yunnan University, Kunming 650500, China.
Yudong ZhangInstitute of Food Crops, Yunnan Academy of Agricultural Sciences, Kunming 650205, China.
Ranjan K ShawInstitute of Food Crops, Yunnan Academy of Agricultural Sciences, Kunming 650205, China.
Xingjie ZhangSchool of Agriculture, Yunnan University, Kunming 650500, China.
Jinfeng LiSchool of Agriculture, Yunnan University, Kunming 650500, China.
Linzhuo LiSchool of Agriculture, Yunnan University, Kunming 650500, China.
Shaoxiong LiSchool of Agriculture, Yunnan University, Kunming 650500, China.
Muhammad AdnanInstitute of Food Crops, Yunnan Academy of Agricultural Sciences, Kunming 650205, China.ORCID 0000-0002-0763-2671
Fuyan JiangInstitute of Food Crops, Yunnan Academy of Agricultural Sciences, Kunming 650205, China.
Yaqi BiInstitute of Food Crops, Yunnan Academy of Agricultural Sciences, Kunming 650205, China.
Xingfu YinInstitute of Food Crops, Yunnan Academy of Agricultural Sciences, Kunming 650205, China.
Xingming FanInstitute of Food Crops, Yunnan Academy of Agricultural Sciences, Kunming 650205, China.ORCID 0009-0009-4742-9246
Yunnan Academy of Agricultural Sciences · CNYunnan University · CN

Funding

National Natural Science Foundation of China U2202204Yunnan Provincial Science and Technology Talent and Platform Program 202205AF150028
6 · The paper itself

Abstract

Tassel weight (TW) is a crucial agronomic trait that significantly affects pollen supply and grain yield development in maize breeding. To improve maize yield and develop new varieties, a comprehensive understanding of the genetic mechanisms underlying tassel weight is essential. In this study, tropical maize inbred lines, namely CML312, CML373, CML444, and YML46, were selected as female parents and crossed with the elite maize inbred line Ye107, which served as the common male parent, to develop a multi-parent population comprising four F8 recombinant inbred line (RIL) subpopulations. Using 6616 high-quality single nucleotide polymorphism (SNP) markers, we conducted genome-wide association analysis (GWAS) and genomic selection (GS) on 642 F8 RILs in four subpopulations across three different environments. Through GWAS, we identified 16 SNPs that were significantly associated with TW, encompassing two stable loci expressed across multiple environments. Furthermore, within the candidate regions of these SNPs, we discovered four novel candidate genes related to TW, namely

Indexed as

Genome-Wide Association StudyInflorescencePhenotypePlant BreedingPolymorphism, Single NucleotideQuantitative Trait LociZea mayscandidate genegenome-wide association studygenomic selectiontassel weight

Identifiers

PMID38339032
PMCPMC10855296
OpenAlexW4391434427

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.