Evidence map›Paper›PMID 38339016›Full record

ArticleInternational journal of molecular sciences2024

Y-Box-Binding Proteins Have a Dual Impact on Cellular Translation.

Irina A Eliseeva, Andrey I Buyan, Egor A Smolin, Karina S Kaliadzenka, Sergey Popov, Ivan V Kulakovskiy, Dmitry N Lyabin

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Irina A EliseevaInstitute of Protein Research, Russian Academy of Sciences, Pushchino 142290, Russia.
Andrey I BuyanInstitute of Protein Research, Russian Academy of Sciences, Pushchino 142290, Russia.ORCID 0000-0001-9105-4028
Egor A SmolinInstitute of Protein Research, Russian Academy of Sciences, Pushchino 142290, Russia.
Karina S KaliadzenkaInstitute of Protein Research, Russian Academy of Sciences, Pushchino 142290, Russia.
Sergey PopovEndocrinology Research Center, Moscow 117036, Russia.
Ivan V KulakovskiyInstitute of Protein Research, Russian Academy of Sciences, Pushchino 142290, Russia.ORCID 0000-0002-6554-8128
Dmitry N LyabinInstitute of Protein Research, Russian Academy of Sciences, Pushchino 142290, Russia.
Institute of Protein Research · RUEndocrinology Research Center · RU

Funding

Ministry of Science and Higher Education of the Russian Federation 075-15-2022-310Russian Science Foundation 19-74-20129П
6 · The paper itself

Abstract

Y-box-binding proteins (YB proteins) are multifunctional DNA- and RNA-binding proteins that play an important role in the regulation of gene expression. The high homology of their cold shock domains and the similarity between their long, unstructured C-terminal domains suggest that Y-box-binding proteins may have similar functions in a cell. Here, we consider the functional interchangeability of the somatic YB proteins YB-1 and YB-3. RNA-seq and Ribo-seq are used to track changes in the mRNA abundance or mRNA translation in HEK293T cells solely expressing YB-1, YB-3, or neither of them. We show that YB proteins have a dual effect on translation. Although the expression of YB proteins stimulates global translation, YB-1 and YB-3 inhibit the translation of their direct CLIP-identified mRNA targets. The impact of YB-1 and YB-3 on the translation of their mRNA targets is similar, which suggests that they can substitute each other in inhibiting the translation of their mRNA targets in HEK293T cells.

Indexed as

DNA-Binding ProteinsProtein BiosynthesisHEK293 CellsHumansRNA, MessengerY-Box-Binding Protein 1DNA-Binding ProteinsRNA, MessengerY-Box-Binding Protein 1PAR-CLIPribo-seqRNA-seqtranslationYB-1YB-3

Identifiers

PMID38339016
PMCPMC10855678
OpenAlexW4391434699

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.