Evidence map›Paper›PMID 38337969›Full record

ArticlePlants (Basel, Switzerland)2024

Efficient Single Nucleotide Polymorphism Marker-Assisted Selection to Fusarium Wilt in Chickpea.

Patricia Castro, Cristina Caballo, Alejandro Carmona, Teresa Millan, Juan Gil, José V Die, Inmaculada Izquierdo, Josefa Rubio

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.6field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Patricia CastroETSIAM-Dpto. Genética, Universidad de Córdoba, Campus de Rabanales, 14071 Córdoba, Spain.ORCID 0000-0002-2598-9260
Cristina CaballoÁrea de Mejora Vegetal y Biotecnología, Instituto Andaluz de Investigación y Formación Agraria, Pesquera, Alimentaria y de la Producción Ecológica (IFAPA), 14080 Córdoba, Spain.
Alejandro CarmonaETSIAM-Dpto. Genética, Universidad de Córdoba, Campus de Rabanales, 14071 Córdoba, Spain.ORCID 0009-0009-8930-5911
Teresa MillanETSIAM-Dpto. Genética, Universidad de Córdoba, Campus de Rabanales, 14071 Córdoba, Spain.ORCID 0000-0003-1302-1794
Juan GilETSIAM-Dpto. Genética, Universidad de Córdoba, Campus de Rabanales, 14071 Córdoba, Spain.
José V DieETSIAM-Dpto. Genética, Universidad de Córdoba, Campus de Rabanales, 14071 Córdoba, Spain.ORCID 0000-0002-7506-8590
Inmaculada IzquierdoSCA Campo de Tejada, 21870 Escacena del Campo, Huelva, Spain.
Josefa RubioÁrea de Mejora Vegetal y Biotecnología, Instituto Andaluz de Investigación y Formación Agraria, Pesquera, Alimentaria y de la Producción Ecológica (IFAPA), 14080 Córdoba, Spain.ORCID 0000-0002-5185-2719
University of Córdoba · ESAndalusian Institute of Agricultural and Fisheries Research and Training · ES

Funding

Andalusian Institute of Agricultural and Fisheries Research and Training PR.AVA23.INV2023.009European Union BELIS (No. 101081878)Ministerio de Ciencia e Innovación PID2020-114952RR-I00Ministerio de Ciencia e Innovación RYC2019-028188-I
6 · The paper itself

Abstract

Fusarium wilt is one of the most destructive chickpea diseases worldwide. Race 5 (Foc5) is the most harmful in the Mediterranean basin. The primary objective of this study is to validate a block of six SNP markers previously mapped in Ca2 in a diverse panel of cultivars, advanced and inbred lines phenotyped for resistance to fusarium wilt. Additionally, we aim to assess the effectiveness of using these markers in the selection of resistant Foc5 lines in an ongoing breeding program. The results showed a 100% coincidence between phenotype and expected haplotype in plant material evaluated for Foc5. We also analyzed 67 inbred lines previously phenotyped by different authors for fusarium wilt reaction, though the specific race was not specified. In these accessions, 65.8% of the analyzed lines exhibited complete correspondence between the phenotype and haplotype. Our results suggest that in early generations it is possible to select resistant materials with reliability, leading to the removal of a significant number of lines, thereby reducing costs and facilitating the handling of materials for additional trait evaluations. Functional annotation of genes delimited by the SNP block revealed several genes in the "response to stimulus" category with potential roles in the resistance reaction.

Indexed as

breedingchickpeafusarium wiltmarker assisted selectionSNPs

Identifiers

PMID38337969
PMCPMC10856910
OpenAlexW4391450381

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.