Evidence map›Paper›PMID 38336977›Full record

ArticleScientific reports2024

Utilization of nicking properties of CRISPR-Cas12a effector for genome editing.

Chan Hyoung Kim, Wi-Jae Lee, Yeounsun Oh, Youngjeon Lee, Hyomin K Lee, Jung Bae Seong, Kyung-Seob Lim, Sang Je Park, Jae-Won Huh, Young-Hyun Kim and 3 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Delivery of functional Cas:DNA nucleoprotein complexes into recipient bacteria through a type IV secretion system.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Chan Hyoung KimNational Primate Research Center (NPRC), Korea Research Institute of Bioscience and Biotechnology (KRIBB), Cheongju, 28116, Republic of Korea.
Wi-Jae LeeDepartment of Life Science, Chung-Ang University, Seoul, 06974, Republic of Korea.
Yeounsun OhDepartment of Life Science, Chung-Ang University, Seoul, 06974, Republic of Korea.
Youngjeon LeeNational Primate Research Center (NPRC), Korea Research Institute of Bioscience and Biotechnology (KRIBB), Cheongju, 28116, Republic of Korea.
Hyomin K LeeDepartment of Medicine, Major in Medical Genetics, Graduate School, Hanyang University, Seoul, 04763, Republic of Korea.
Jung Bae SeongNational Primate Research Center (NPRC), Korea Research Institute of Bioscience and Biotechnology (KRIBB), Cheongju, 28116, Republic of Korea.
Kyung-Seob LimFuturistic Animal Resource and Research Center (FARRC), Korea Research Institute of Bioscience and Biotechnology (KRIBB), Cheongju, Republic of Korea.
Sang Je ParkNational Primate Research Center (NPRC), Korea Research Institute of Bioscience and Biotechnology (KRIBB), Cheongju, 28116, Republic of Korea.
Jae-Won HuhNational Primate Research Center (NPRC), Korea Research Institute of Bioscience and Biotechnology (KRIBB), Cheongju, 28116, Republic of Korea.
Young-Hyun KimNational Primate Research Center (NPRC), Korea Research Institute of Bioscience and Biotechnology (KRIBB), Cheongju, 28116, Republic of Korea.
Kyoung Mi KimDepartment of Biological Sciences, Chungnam National University, Daejeon, Republic of Korea. km.kim@cnu.ac.kr.
Junho K HurDepartment of Genetics, College of Medicine, Hanyang University, Seoul, 04763, Republic of Korea. juhur@hanyang.ac.kr.
Seung Hwan LeeDepartment of Life Science, Chung-Ang University, Seoul, 06974, Republic of Korea. lsh080390@cau.ac.kr.
Korea Research Institute of Bioscience and Biotechnology · KRChung-Ang University · KRChungnam National University · KRHanyang University · KR

Funding

Korean Ministry of Education, Science and Technology 2022R1A2C4001609, 2020R1C1C1010869, 2021M3A9I4024452the Korean Fund for Regenerative Medicine (KFRM) grant funded by the Korea government (the Ministry of Science and ICT, the Ministry of Health & Welfare). (22A0203L1)the Korea Research Institute of Bioscience and Biotechnology (KRIBB; Research Initiative Program) KGM5282322, KGM4562323, KGM5382221
6 · The paper itself

Abstract

The CRISPR-Cas nickase system for genome editing has attracted considerable attention owing to its safety, efficiency, and versatility. Although alternative effectors to Cas9 have the potential to expand the scope of genome editing, their application has not been optimized. Herein, we used an enhanced CRISPR-Cas12a nickase system to induce mutations by targeting genes in a human-derived cell line. The optimized CRISPR-Cas12a nickase system effectively introduced mutations into target genes under a specific directionality and distance between nickases. In particular, the single-mode Cas12a nickase system can induce the target-specific mutations with less DNA double-strand breaks. By inducing mutations in the Thymine-rich target genes in single- or dual-mode, Cas12a nickase compensates the limitations of Cas9 nickase and is expected to contribute to the development of future genome editing technologies.

Indexed as

CRISPR-Cas SystemsGene EditingDeoxyribonuclease IDNA Breaks, Double-StrandedHumansMutationDeoxyribonuclease I

Identifiers

PMID38336977
PMCPMC10858195
OpenAlexW4391683448

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.