Evidence map›Paper›PMID 38334781›Full record

ArticlePlant cell reports2024

Transcriptome analysis reveals the effect of propyl gallate on kiwifruit callus formation.

Tianyuan Li, Tin Shen, Kai Shi, Yunfeng Zhang

Abstract read
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In one paragraph

Article in Plant cell reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 2 countries.

Tianyuan LiSchool of Life Sciences, Yunnan Normal University, Kunming, 650500, China.
Tin ShenSchool of Life Sciences, Yunnan Normal University, Kunming, 650500, China.
Kai ShiSchool of Life Sciences, Yunnan Normal University, Kunming, 650500, China.
Yunfeng ZhangSchool of Life Sciences, Yunnan Normal University, Kunming, 650500, China. zhyunfeng001@163.com.ORCID http://orcid.org/0000-0002-1844-6268
Yunnan Normal University · CN

Funding

National Natural Science Foundation of China 31960066
6 · The paper itself

Abstract

key messageExploring the potential action mechanisms of reactive oxygen species during the callus inducing, they can activate specific metabolic pathways in explants to regulate callus development. Reactive oxygen species (ROS) play an important role in the regulation of plant growth and development, but the mechanism of their action on plant callus formation remains to be elucidated. To address this question, kiwifruit was selected as the explant for callus induction, and the influence of ROS on callus formation was investigated by introducing propyl gallate (PG) as an antioxidant into the medium used for inducing callus. The results have unveiled that the inclusion of PG in the medium has disturbed the equilibrium of ROS during the formation of the kiwifruit callus. We selected the callus that was induced by the addition of 0.05 mmol/L PG to the MS medium. The callus exhibited a significant difference in the amount compared to the control medium without PG. The callus induced by the MS medium without PG was used as the control for comparison. KEGG enrichment indicated that PG exposure resulted in significant differences in gene expression in related pathways, such as phytohormone signaling and glutathione in kiwifruit callus. Weighted gene co-expression analysis indicated that the pertinent regulatory networks of both ROS and phytohormone signaling were critical for the establishment of callus in kiwifruit leaves. In addition, during the process of callus establishment, the ROS level of the explants was also closely related to the genes for transmembrane transport of substances, cell wall formation, and plant organ establishment. This investigation expands the theory of ROS-regulated callus formation and presents a new concept for the expeditious propagation of callus in kiwifruit.

Indexed as

ActinidiaPlant Growth RegulatorsGene Expression ProfilingPropyl GallateReactive Oxygen SpeciesTranscriptomePlant Growth RegulatorsPropyl GallateReactive Oxygen SpeciesComparative transcriptomeGene expressionPlant tissue cultureSignal transduction pathway networksWGCNA

Identifiers

PMID38334781
OpenAlexW4391679704

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.