Evidence map›Paper›PMID 38332568›Full record

ArticleMicrobial biotechnology2024

High-efficiency genome editing by Cas12a ribonucleoprotein complex in Euglena gracilis.

Toshihisa Nomura, June-Silk Kim, Marumi Ishikawa, Kengo Suzuki, Keiichi Mochida

Abstract read
In one paragraph

Article in Microbial biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Mapping the proteome landscape inPlant signaling & behavior · 2026
    Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Engineering Wax Ester Composition in Euglena gracilis Using Genome Editing.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  7. Harnessing microalgae for bioproducts: innovations in synthetic biology.World journal of microbiology & biotechnology · 2025
    Review
  8. Progress and challenges in CRISPR/Cas applications in microalgae.Journal of microbiology (Seoul, Korea) · 2025
    Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Toshihisa NomuraRIKEN Center for Sustainable Resource Science, Yokohama, Japan.ORCID 0000-0002-6806-3708
June-Silk KimRIKEN Center for Sustainable Resource Science, Yokohama, Japan.ORCID 0000-0002-4703-609X
Marumi IshikawaRIKEN Baton Zone Program, Yokohama, Japan.
Kengo SuzukiRIKEN Baton Zone Program, Yokohama, Japan.
Keiichi MochidaRIKEN Center for Sustainable Resource Science, Yokohama, Japan.ORCID 0000-0003-1299-0024

Funding

Green Technologies for Excellence Program JPMJGX23B0Japan Science and Technology Agency Grant-in-Aid for Scientific Research (C) 21K05511Program on Open Innovation Platform with Enterprises, Research Institute and Academia JPMJOP1832Science and Technology Research Partnership for Sustainable Development JPMJSA2204
6 · The paper itself

Abstract

Transgene-free genome editing based on clustered regularly interspaced short palindromic repeats (CRISPR) technology is key to achieving genetic engineering in microalgae for basic research and industrial applications. Euglena gracilis, a unicellular phytoflagellate microalga, is a promising biomaterial for foods, feeds, cosmetics and biofuels. However, methods for the genetic manipulation of E. gracilis are still limited. Here, we developed a high-efficiency, transgene-free genome editing method for E. gracilis using Lachnospiraceae bacterium CRISPR-associated protein 12a (LbCas12a) ribonucleoprotein (RNP) complex, which complements the previously established Cas9 RNP-based method. Through the direct delivery of LbCas12a-containing RNPs, our method reached mutagenesis rates of approximately 77.2-94.5% at two different E. gracilis target genes, Glucan synthase-like 2 (EgGSL2) and a phytoene synthase gene (EgcrtB). Moreover, in addition to targeted mutagenesis, we demonstrated efficient knock-in and base editing at the target site using LbCas12a-based RNPs with a single-stranded DNA donor template in E. gracilis. This study extends the genetic engineering capabilities of Euglena to accelerate its basic use for research and engineering for bioproduction.

Indexed as

Euglena gracilisGene EditingCRISPR-Cas SystemsGenetic EngineeringRibonucleoproteinsRibonucleoproteins

Identifiers

PMID38332568
PMCPMC10884871

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.