Evidence map›Paper›PMID 38331917›Full record

ArticleNature communications2024

The acidic intrinsically disordered region of the inflammatory mediator HMGB1 mediates fuzzy interactions with CXCL12.

Malisa Vittoria Mantonico, Federica De Leo, Giacomo Quilici, Liam Sean Colley, Francesco De Marchis, Massimo Crippa, Rosanna Mezzapelle, Tim Schulte, Chiara Zucchelli, Chiara Pastorello and 7 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
7.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 30 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Structural and molecular principles of DAMP biology.Nature structural & molecular biology · 2026
    Review
  5. Adaptive Disorder as the Hallmark of Nanobodies Antigen-Binding Loops.Journal of chemical information and modeling · 2026
    Article
  6. Article
  7. Generative design of intrinsically disordered protein regions with IDiom.bioRxiv : the preprint server for biology · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Review
  14. Frontiers in immunology · 2026
    Article
  15. Review
  16. Article
  17. Article
  18. Article
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 1 country.

Malisa Vittoria MantonicoBiomolecular NMR Laboratory, Division of Genetics and Cell Biology, IRCCS Ospedale San Raffaele, Milan, Italy.ORCID 0000-0003-2883-6400
Federica De LeoBiomolecular NMR Laboratory, Division of Genetics and Cell Biology, IRCCS Ospedale San Raffaele, Milan, Italy.
Giacomo QuiliciBiomolecular NMR Laboratory, Division of Genetics and Cell Biology, IRCCS Ospedale San Raffaele, Milan, Italy.
Liam Sean ColleyHMGBiotech S.r.l., 20133, Milan, Italy.ORCID 0000-0002-3180-017X
Francesco De MarchisSchool of Medicine, Università Vita e Salute-San Raffaele, Milan, Italy.
Massimo CrippaChromatin Dynamics Unit, Division of Genetics and Cell Biology, IRCCS Ospedale San Raffaele, Milan, Italy.ORCID 0000-0003-3214-9670
Rosanna MezzapelleSchool of Medicine, Università Vita e Salute-San Raffaele, Milan, Italy.ORCID 0000-0002-1271-8998
Tim SchulteInstitute of Molecular and Translational Cardiology, IRCCS Policlinico San Donato, Milan, Italy.
Chiara ZucchelliBiomolecular NMR Laboratory, Division of Genetics and Cell Biology, IRCCS Ospedale San Raffaele, Milan, Italy.
Chiara PastorelloBiomolecular NMR Laboratory, Division of Genetics and Cell Biology, IRCCS Ospedale San Raffaele, Milan, Italy.ORCID 0009-0009-6566-6624
Camilla CarmenoBiomolecular NMR Laboratory, Division of Genetics and Cell Biology, IRCCS Ospedale San Raffaele, Milan, Italy.ORCID 0000-0002-2511-3277
Francesca CaprioglioSchool of Medicine, Università Vita e Salute-San Raffaele, Milan, Italy.ORCID 0000-0001-9505-8157
Stefano RicagnoInstitute of Molecular and Translational Cardiology, IRCCS Policlinico San Donato, Milan, Italy.
Gabriele GiachinDepartment of Chemical Sciences (DiSC), University of Padua, 35131, Padova, Italy.ORCID 0000-0001-7550-0307
Michela GhittiBiomolecular NMR Laboratory, Division of Genetics and Cell Biology, IRCCS Ospedale San Raffaele, Milan, Italy. ghitti.michela@hsr.it.ORCID 0000-0003-4059-0095
Marco Emilio BianchiSchool of Medicine, Università Vita e Salute-San Raffaele, Milan, Italy.ORCID 0000-0002-5329-6445
Giovanna MuscoBiomolecular NMR Laboratory, Division of Genetics and Cell Biology, IRCCS Ospedale San Raffaele, Milan, Italy. musco.giovanna@hsr.it.ORCID 0000-0002-0469-2994
IRCCS Ospedale San Raffaele · ITVita-Salute San Raffaele University · ITIRCCS Policlinico San Donato · ITItalian Association for Cancer Research · ITUniversity of Milan · ITUniversity of Milano-Bicocca · ITUniversity of Padua · IT

Funding

Associazione Italiana per la Ricerca sul Cancro (Italian Association for Cancer Research) 24118Associazione Italiana per la Ricerca sul Cancro (Italian Association for Cancer Research) IG 2018 - ID 21440Associazione Italiana per la Ricerca sul Cancro (Italian Association for Cancer Research) IG 2020 - ID. 24702Associazione Italiana per la Ricerca sul Cancro (Italian Association for Cancer Research) MFAG27415
6 · The paper itself

Abstract

Chemokine heterodimers activate or dampen their cognate receptors during inflammation. The CXCL12 chemokine forms with the fully reduced (fr) alarmin HMGB1 a physiologically relevant heterocomplex (frHMGB1•CXCL12) that synergically promotes the inflammatory response elicited by the G-protein coupled receptor CXCR4. The molecular details of complex formation were still elusive. Here we show by an integrated structural approach that frHMGB1•CXCL12 is a fuzzy heterocomplex. Unlike previous assumptions, frHMGB1 and CXCL12 form a dynamic equimolar assembly, with structured and unstructured frHMGB1 regions recognizing the CXCL12 dimerization surface. We uncover an unexpected role of the acidic intrinsically disordered region (IDR) of HMGB1 in heterocomplex formation and its binding to CXCR4 on the cell surface. Our work shows that the interaction of frHMGB1 with CXCL12 diverges from the classical rigid heterophilic chemokines dimerization. Simultaneous interference with multiple interactions within frHMGB1•CXCL12 might offer pharmacological strategies against inflammatory conditions.

Indexed as

Chemokine CXCL12HMGB1 ProteinHumansInflammationReceptors, CXCR4Signal TransductionChemokine CXCL12CXCL12 protein, humanHMGB1 ProteinReceptors, CXCR4

Identifiers

PMID38331917
PMCPMC10853541
OpenAlexW4391643207

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.