Evidence map›Paper›PMID 38328782›Full record

ArticlePNAS nexus2024

Decoding the genetic symphony: Profiling protein-coding and long noncoding RNA expression in T-acute lymphoblastic leukemia for clinical insights.

Deepak Verma, Shruti Kapoor, Sarita Kumari, Disha Sharma, Jay Singh, Mercilena Benjamin, Sameer Bakhshi, Rachna Seth, Baibaswata Nayak, Atul Sharma and 7 more

Open access · goldAbstract read
In one paragraph

Article in PNAS nexus, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 2 institutions in 1 country.

Deepak VermaLaboratory Oncology, Dr BRAIRCH, All India Institute of Medical Sciences, New Delhi-110029, India.ORCID https://orcid.org/0000-0003-4699-9609
Shruti KapoorCSIR-Institute of Genomics and Integrative Biology, New Delhi-110025, India.ORCID https://orcid.org/0000-0003-4216-8488
Sarita KumariLaboratory Oncology, Dr BRAIRCH, All India Institute of Medical Sciences, New Delhi-110029, India.ORCID https://orcid.org/0000-0002-9566-2933
Disha SharmaCSIR-Institute of Genomics and Integrative Biology, New Delhi-110025, India.ORCID https://orcid.org/0000-0001-9486-2709
Jay SinghLaboratory Oncology, Dr BRAIRCH, All India Institute of Medical Sciences, New Delhi-110029, India.
Mercilena BenjaminLaboratory Oncology, Dr BRAIRCH, All India Institute of Medical Sciences, New Delhi-110029, India.ORCID https://orcid.org/0000-0003-3919-0254
Sameer BakhshiDepartment of Medical Oncology, Dr BRAIRCH, All India Institute of Medical Sciences, New Delhi-110029, India.
Rachna SethDepartment of Pediatrics, All India Institute of Medical Sciences, New Delhi-110029, India.
Baibaswata NayakDepartment of Gastroenterology, All India Institute of Medical Science, New Delhi-110029, India.ORCID https://orcid.org/0000-0003-2238-6015
Atul SharmaDepartment of Medical Oncology, Dr BRAIRCH, All India Institute of Medical Sciences, New Delhi-110029, India.
Raja PramanikDepartment of Medical Oncology, Dr BRAIRCH, All India Institute of Medical Sciences, New Delhi-110029, India.ORCID https://orcid.org/0000-0003-0483-6254
Jayanth Kumar PalanichamyDepartment of Biochemistry, All India Institute of Medical Sciences, New Delhi-110029, India.ORCID https://orcid.org/0000-0002-3903-7252
Sridhar SivasubbuCSIR-Institute of Genomics and Integrative Biology, New Delhi-110025, India.ORCID https://orcid.org/0000-0003-2411-4240
Vinod ScariaCSIR-Institute of Genomics and Integrative Biology, New Delhi-110025, India.ORCID https://orcid.org/0000-0001-7644-7181
Mohit AroraDepartment of Biochemistry, All India Institute of Medical Sciences, New Delhi-110029, India.ORCID https://orcid.org/0000-0002-7417-5036
Rajive KumarLaboratory Oncology, Dr BRAIRCH, All India Institute of Medical Sciences, New Delhi-110029, India.
Anita ChopraLaboratory Oncology, Dr BRAIRCH, All India Institute of Medical Sciences, New Delhi-110029, India.ORCID https://orcid.org/0000-0002-0238-8702
All India Institute of Medical Sciences · INInstitute of Genomics and Integrative Biology · IN

Funding

DBT-Wellcome Trust India Alliance IA/CPHI/17/1/503333Wellcome Trust
6 · The paper itself

Abstract

T-acute lymphoblastic leukemia (T-ALL) is a heterogeneous malignancy characterized by the abnormal proliferation of immature T-cell precursors. Despite advances in immunophenotypic classification, understanding the molecular landscape and its impact on patient prognosis remains challenging. In this study, we conducted comprehensive RNA sequencing in a cohort of 35 patients with T-ALL to unravel the intricate transcriptomic profile. Subsequently, we validated the prognostic relevance of 23 targets, encompassing (i) protein-coding genes-

Indexed as

ETP-ALLgene expressionimmunophenotypeleukemiaT-ALLtranscriptomics

Identifiers

PMID38328782
PMCPMC10847906
OpenAlexW4390830270

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.