Evidence map›Paper›PMID 38328224›Full record

ArticlebioRxiv : the preprint server for biology2024

Standardised Measurements for Monitoring and Comparing Multiphoton Microscope Systems.

Robert M Lees, Isaac H Bianco, Robert A A Campbell, Natalia Orlova, Darcy S Peterka, Bruno Pichler, Spencer LaVere Smith, Dimitri Yatsenko, Che-Hang Yu, Adam M Packer

Open access · greenAbstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 9 institutions in 3 countries.

Robert M LeesScience and Technology Facilities Council, Octopus imaging facility, Research Complex at Harwell, Harwell Campus, Oxfordshire, UK.ORCID 0000-0001-5473-4219
Isaac H BiancoDepartment of Neuroscience, Physiology & Pharmacology, University College London, UK.ORCID 0000-0002-3149-4862
Robert A A CampbellSainsbury Wellcome Centre, University College London, UK.ORCID 0000-0002-8330-4477
Natalia OrlovaAllen Institute, Seattle, USA.ORCID 0000-0001-6741-4951
Darcy S PeterkaMortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA.ORCID 0000-0001-7351-5820
Bruno PichlerIndependent NeuroScience Services INSS Ltd, Lewes, East Sussex, UK.ORCID 0000-0002-8545-2991
Spencer LaVere SmithDepartment of Electrical and Computer Engineering, University of California Santa Barbara, USA.ORCID 0000-0002-2021-7034
Dimitri YatsenkoDataJoint Inc., Houston, TX.ORCID 0000-0002-1844-641X
Che-Hang YuDepartment of Electrical and Computer Engineering, University of California Santa Barbara, USA.ORCID 0000-0002-0353-9752
Adam M PackerDepartment of Physiology, Anatomy, and Genetics, University of Oxford, Oxford, UK.ORCID 0000-0001-5884-794X
University of California, Santa Barbara · USAllen Institute · USBrain (Germany) · DEDataJoint NEURO (United States) · USEast Sussex County Council · GBSainsbury Laboratory · GBScience and Technology Facilities Council · GBUniversity College London · GBUniversity of Oxford · GB

Funding

Modeling multi-area dynamics during motor controlU19NS104649 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI COSTA, RUI M. · 2017 to 2021
$15.3M
DataJoint Pipelines for NeurophysiologyU24NS116470 · NINDS · VATHES INC. · PI YATSENKO, DIMITRI · 2020 to 2024
$3.7M
Cortical visual processing for navigationRF1NS121919 · NINDS · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI GOARD, MICHAEL, NIELL, CRISTOPHER M · 2021 to 2021
$2.8M
Optimization and dissemination of non-linear Acousto-Optic Lens two-photon microscopy for high speed multiscale 3D imagingU01NS113273 · NINDS · UNIVERSITY COLLEGE LONDON · PI CARDIN, JESSICA A, DIAMOND, JEFFREY S · 2019 to 2021
$1.7M
Visual representations across cortical areasR01EY035378 · NEI · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI SPENCER LAVERE SMITH · 2023 to 2026
$1.6M
NEI NIH HHS R01 EY035378NINDS NIH HHS RF1 NS121919NINDS NIH HHS U01 NS113273NINDS NIH HHS U19 NS104649NINDS NIH HHS U24 NS116470Wellcome Trust 204651/Z/16/Z
6 · The paper itself

Abstract

The goal of this protocol is to enable better characterisation of multiphoton microscopy hardware across a large user base. The scope of this protocol is purposefully limited to focus on hardware, touching on software and data analysis routines only where relevant. The intended audiences are scientists using and building multiphoton microscopes in their laboratories. The goal is that any scientist, not only those with optical expertise, can test whether their multiphoton microscope is performing well and producing consistent data over the lifetime of their system.

Identifiers

PMID38328224
PMCPMC10849699
OpenAlexW4391130549

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.