Evidence map›Paper›PMID 38327353›Full record

ArticleBiodiversity data journal2023

An acoustic detection dataset of birds (Aves) in montane forests using a deep learning approach.

Shih-Hung Wu, Jerome Chie-Jen Ko, Ruey-Shing Lin, Wen-Ling Tsai, Hsueh-Wen Chang

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Article in Biodiversity data journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

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5 authors.

Shih-Hung WuDepartment of Biological Sciences, National Sun Yat-Sen University, Kaohsiung, Taiwan Department of Biological Sciences, National Sun Yat-Sen University Kaohsiung Taiwan.ORCID https://orcid.org/0000-0003-3619-0646
Jerome Chie-Jen KoEndemic Species Research Institute, Nantou, Taiwan Endemic Species Research Institute Nantou Taiwan.ORCID https://orcid.org/0000-0002-8343-604X
Ruey-Shing LinEndemic Species Research Institute, Nantou, Taiwan Endemic Species Research Institute Nantou Taiwan.
Wen-Ling TsaiYushan National Park Headquarters, Nantou, Taiwan Yushan National Park Headquarters Nantou Taiwan.
Hsueh-Wen ChangDepartment of Biological Sciences, National Sun Yat-Sen University, Kaohsiung, Taiwan Department of Biological Sciences, National Sun Yat-Sen University Kaohsiung Taiwan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Long-term monitoring is needed to understand the statuses and trends of wildlife communities in montane forests, such as those in Yushan National Park (YSNP), Taiwan. Integrating passive acoustic monitoring (PAM) with an automated sound identifier, a long-term biodiversity monitoring project containing six PAM stations, was launched in YSNP in January 2020 and is currently ongoing. SILIC, an automated wildlife sound identification model, was used to extract sounds and species information from the recordings collected. Animal vocal activity can reflect their breeding status, behaviour, population, movement and distribution, which may be affected by factors, such as habitat loss, climate change and human activity. This massive amount of wildlife vocalisation dataset can provide essential information for the National Park's headquarters on resource management and decision-making. It can also be valuable for those studying the effects of climate change on animal distribution and behaviour at a regional or global scale. New information: To our best knowledge, this is the first open-access dataset with species occurrence data extracted from sounds in soundscape recordings by artificial intelligence. We obtained seven bird species for the first release, with more bird species and other taxa, such as mammals and frogs, to be updated annually. Raw recordings containing over 1.7 million one-minute recordings collected between the years 2020 and 2021 were analysed and SILIC identified 6,243,820 vocalisations of seven bird species in 439,275 recordings. The automatic detection had a precision of 0.95 and the recall ranged from 0.48 to 0.80. In terms of the balance between precision and recall, we prioritised increasing precision over recall in order to minimise false positive detections. In this dataset, we summarised the count of vocalisations detected per sound class per recording which resulted in 802,670 occurrence records. Unlike data from traditional human observation methods, the number of observations in the Darwin Core "organismQuantity" column refers to the number of vocalisations detected for a specific bird species and cannot be directly linked to the number of individuals.We expect our dataset will be able to help fill the data gaps of fine-scale avian temporal activity patterns in montane forests and contribute to studies concerning the impacts of climate change on montane forest ecosystems on regional or global scales.

Indexed as

automated sound identificationAvesbiodiversitypassive acoustic monitoringSILICsoundscapeYushan National Park

Identifiers

PMID38327353
PMCPMC10848598

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.