Evidence map›Paper›PMID 38326345›Full record

ArticleNature communications2024

Heterotypic interactions can drive selective co-condensation of prion-like low-complexity domains of FET proteins and mammalian SWI/SNF complex.

Richoo B Davis, Anushka Supakar, Aishwarya Kanchi Ranganath, Mahdi Muhammad Moosa, Priya R Banerjee

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
7.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 31 citations in OpenAlex.

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  14. Disruption of Microhomology-mediated End-joining in Ewing Sarcoma.bioRxiv : the preprint server for biology · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Richoo B DavisDepartment of Physics, University at Buffalo, Buffalo, NY, 14260, USA.ORCID 0000-0003-3428-3646
Anushka SupakarDepartment of Biological Sciences, University at Buffalo, Buffalo, NY, 14260, USA.
Aishwarya Kanchi RanganathDepartment of Chemical and Biological Engineering, University at Buffalo, Buffalo, NY, 14260, USA.
Mahdi Muhammad MoosaDepartment of Physics, University at Buffalo, Buffalo, NY, 14260, USA.ORCID 0000-0002-2823-3178
Priya R BanerjeeDepartment of Physics, University at Buffalo, Buffalo, NY, 14260, USA. prbanerj@buffalo.edu.ORCID 0000-0002-6169-1461
University at Buffalo, State University of New York · US

Funding

Quantifying Physiologic and Pathologic Viscoelastic Phases of Biomolecular Condensates by Correlative Force and Fluorescence MicroscopyR35GM138186 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI BANERJEE, PRIYA R. · 2020 to 2025
$4.4M
Mechanism of liquid phase homeostasis of prion-like RNA binding proteinsR21AG064258 · NIA · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI BANERJEE, PRIYA R. · 2019 to 2020
$435k
NIA NIH HHS R21 AG064258NIGMS NIH HHS R35 GM138186
6 · The paper itself

Abstract

Prion-like domains (PLDs) are low-complexity protein sequences enriched within nucleic acid-binding proteins including those involved in transcription and RNA processing. PLDs of FUS and EWSR1 play key roles in recruiting chromatin remodeler mammalian SWI/SNF (mSWI/SNF) complex to oncogenic FET fusion protein condensates. Here, we show that disordered low-complexity domains of multiple SWI/SNF subunits are prion-like with a strong propensity to undergo intracellular phase separation. These PLDs engage in sequence-specific heterotypic interactions with the PLD of FUS in the dilute phase at sub-saturation conditions, leading to the formation of PLD co-condensates. In the dense phase, homotypic and heterotypic PLD interactions are highly cooperative, resulting in the co-mixing of individual PLD phases and forming spatially homogeneous condensates. Heterotypic PLD-mediated positive cooperativity in protein-protein interaction networks is likely to play key roles in the co-phase separation of mSWI/SNF complex with transcription factors containing homologous low-complexity domains.

Indexed as

PrionsAnimalsChromatinChromatin Assembly and DisassemblyMammalsTranscription FactorsChromatinPrionsTranscription Factors

Identifiers

PMID38326345
PMCPMC10850361
OpenAlexW4391593929

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.