Evidence map›Paper›PMID 38324783›Full record

ArticleJournal of the American Society for Mass Spectrometry2024

Methionine Alkylation as an Approach to Quantify Methionine Oxidation Using Mass Spectrometry.

Margaret Hoare, Ruiyue Tan, Kevin A Welle, Kyle Swovick, Jennifer R Hryhorenko, Sina Ghaemmaghami

Open access · hybridAbstract read
In one paragraph

Article in Journal of the American Society for Mass Spectrometry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Margaret HoareDepartment of Biology, University of Rochester, Rochester, New York 14627, United States.
Ruiyue TanDepartment of Biology, University of Rochester, Rochester, New York 14627, United States.
Kevin A WelleUniversity of Rochester Mass Spectrometry Resource Laboratory, Rochester, New York 14627, United States.
Kyle SwovickUniversity of Rochester Mass Spectrometry Resource Laboratory, Rochester, New York 14627, United States.
Jennifer R HryhorenkoUniversity of Rochester Mass Spectrometry Resource Laboratory, Rochester, New York 14627, United States.
Sina GhaemmaghamiDepartment of Biology, University of Rochester, Rochester, New York 14627, United States.ORCID 0000-0002-8696-2950
University of Rochester · US

Funding

The prevalence and mechanism of selectivity in basal autophagyR35GM119502 · NIGMS · UNIVERSITY OF ROCHESTER · PI SINA GHAEMMAGHAMI · 2016 to 2026
$5.9M
Orbitrap Fusion Lumos Mass Spectrometer for UR Proteomics ResearchS10OD025242 · OD · UNIVERSITY OF ROCHESTER · PI GHAEMMAGHAMI, SINA · 2018 to 2018
$1.1M
NIGMS NIH HHS R35 GM119502NIH HHS S10 OD025242
6 · The paper itself

Abstract

Post-translational oxidation of methionine residues can destabilize proteins or modify their functions. Although levels of methionine oxidation can provide important information regarding the structural integrity and regulation of proteins, their quantitation is often challenging as analytical procedures in and of themselves can artifactually oxidize methionines. Here, we develop a mass-spectrometry-based method called Methionine Oxidation by Blocking with Alkylation (MObBa) that quantifies methionine oxidation by selectively alkylating and blocking unoxidized methionines. Thus, alkylated methionines can be used as a stable proxy for unoxidized methionines. Using proof of concept experiments, we demonstrate that MObBa can be used to measure methionine oxidation levels within individual synthetic peptides and on proteome-wide scales. MObBa may provide a straightforward experimental strategy for mass spectrometric quantitation of methionine oxidation.

Indexed as

MethionineRacemethionineAlkylationMass SpectrometryOxidation-ReductionProteomeMethionineProteomeRacemethioninemass spectrometry (MS)methionine alkylationmethionine oxidationproteomics

Identifiers

PMID38324783
PMCPMC10921467
OpenAlexW4391617820

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.