Evidence map›Paper›PMID 38323613›Full record

ArticleCurrent pharmaceutical design2024

LSTM-SAGDTA: Predicting Drug-target Binding Affinity with an Attention Graph Neural Network and LSTM Approach.

Wenjing Qiu, Qianle Liang, Liyi Yu, Xuan Xiao, Wangren Qiu, Weizhong Lin

Abstract read
In one paragraph

Article in Current pharmaceutical design, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

6 authors.

Wenjing QiuSchool of Information Engineering, Jingdezhen Ceramic University, Jingdezhen 333000, China.
Qianle LiangSchool of Information Engineering, Jingdezhen Ceramic University, Jingdezhen 333000, China.
Liyi YuSchool of Information Engineering, Jingdezhen Ceramic University, Jingdezhen 333000, China.
Xuan XiaoSchool of Information Engineering, Jingdezhen Ceramic University, Jingdezhen 333000, China.
Wangren QiuSchool of Information Engineering, Jingdezhen Ceramic University, Jingdezhen 333000, China.
Weizhong LinSchool of Information Engineering, Jingdezhen Ceramic University, Jingdezhen 333000, China.ORCID 0000-0002-7537-1899

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionDrug development is a challenging and costly process, yet it plays a crucial role in improving healthcare outcomes. Drug development requires extensive research and testing to meet the demands for economic efficiency, cures, and pain relief.

methodsDrug development is a vital research area that necessitates innovation and collaboration to achieve significant breakthroughs. Computer-aided drug design provides a promising avenue for drug discovery and development by reducing costs and improving the efficiency of drug design and testing.

resultsIn this study, a novel model, namely LSTM-SAGDTA, capable of accurately predicting drug-target binding affinity, was developed. We employed SeqVec for characterizing the protein and utilized the graph neural networks to capture information on drug molecules. By introducing self-attentive graph pooling, the model achieved greater accuracy and efficiency in predicting drug-target binding affinity.

conclusionMoreover, LSTM-SAGDTA obtained superior accuracy over current state-of-the-art methods only by using less training time. The results of experiments suggest that this method represents a highprecision solution for the DTA predictor.

Indexed as

Neural Networks, ComputerDrug DesignDrug DevelopmentHumansPharmaceutical PreparationsProteinsPharmaceutical PreparationsProteinsbinding affinityDTA predictor.graph attention networkshigh-throughput screeningLSTM-SAGDTAstate-of-the-art methods

Identifiers

PMID38323613
PMCPMC11071654

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.