ArticleJournal of undergraduate neuroscience education : JUNE : a publication of FUN, Faculty for Undergraduate Neuroscience2022
Enhancing Student Research Experiences with Open Data from the Allen Brain Map.
Article in Journal of undergraduate neuroscience education : JUNE : a publication of FUN, Faculty for Undergraduate Neuroscience, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
4 citing papers in PubMed.
- A Case for the Use of Open Data as a Tool to Incorporate Socioscientific Topics into Neuroscience Education.Journal of undergraduate neuroscience education : JUNE : a publication of FUN, Faculty for Undergraduate Neuroscience · 2024Article
- Teaching Neuroscience: Reviving Neuroanatomy, Notes on the 2022 Society for Neuroscience Professional Development Workshop on Teaching.Journal of undergraduate neuroscience education : JUNE : a publication of FUN, Faculty for Undergraduate Neuroscience · 2022Article
- An Introduction to the Proceedings of the 2020 FUN Summer Virtual Meeting.Journal of undergraduate neuroscience education : JUNE : a publication of FUN, Faculty for Undergraduate Neuroscience · 2022Article
- Pandemic Teaching: Using the Allen Cell Types Database for Final Semester Projects in an Undergraduate Neurophysiology Lab Course.Journal of undergraduate neuroscience education : JUNE : a publication of FUN, Faculty for Undergraduate Neuroscience · 2021Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
1 author.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The Allen Brain Map is the main data repository for the Allen Institute for Brain Science, containing big, open datasets commonly used in neuroscience research (Allen Institute for Brain Science, 2022). Open data from the Allen Brain Map can be used to teach core concepts in neuroscience, data analysis methods, and other critical skills and knowledge to neuroscience students. These datasets can be used as the main data source for completely online lab experiences, or analyzed in combination with data students collect themselves. Applications may range in scope and format from a short worksheet used in a single class session to a coding tutorial to a guided independent research project. While open online data cannot fully replace lab experiences for learning techniques, they can be used to expose students to analysis of big data, introduce resources widely used in the field, and teach skills like statistics and coding. This article reviews potential assignment formats where big and open data can be applied, introduces selected popular resources and sample use cases for each, and discusses benefits and limitations of open online data for lab experiences. Some specific applications in the context of distance learning are also detailed.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.