Evidence map›Paper›PMID 38322614›Full record

ArticleFrontiers in physiology2024

Using dropout based active learning and surrogate models in the inverse viscoelastic parameter identification of human brain tissue.

Jan Hinrichsen, Carl Ferlay, Nina Reiter, Silvia Budday

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Article in Frontiers in physiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jan HinrichsenInstitute of Continuum Mechanics and Biomechanics, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany.
Carl FerlayInstitute of Continuum Mechanics and Biomechanics, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany.
Nina ReiterInstitute of Continuum Mechanics and Biomechanics, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany.
Silvia BuddayInstitute of Continuum Mechanics and Biomechanics, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Inverse mechanical parameter identification enables the characterization of ultrasoft materials, for which it is difficult to achieve homogeneous deformation states. However, this usually involves high computational costs that are mainly determined by the complexity of the forward model. While simulation methods like finite element models can capture nearly arbitrary geometries and implement involved constitutive equations, they are also computationally expensive. Machine learning models, such as neural networks, can help mitigate this problem when they are used as surrogate models replacing the complex high fidelity models. Thereby, they serve as a reduced order model after an initial training phase, where they learn the relation of in- and outputs of the high fidelity model. The generation of the required training data is computationally expensive due to the necessary simulation runs. Here, active learning techniques enable the selection of the "most rewarding" training points in terms of estimated gained accuracy for the trained model. In this work, we present a recurrent neural network that can well approximate the output of a viscoelastic finite element simulation while significantly speeding up the evaluation times. Additionally, we use Monte-Carlo dropout based active learning to identify highly informative training data. Finally, we showcase the potential of the developed pipeline by identifying viscoelastic material parameters for human brain tissue.

Indexed as

active learninghuman brain tissueneural networkparameter identificationsurrogate model

Identifiers

PMID38322614
PMCPMC10844559

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.