Evidence map›Paper›PMID 38319570›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2024

A Luciferase Reporter Assay to Detect Cellular Hypoxia In Vitro.

Masayuki Inubushi, Yasuto Takeuchi, Chika Murai, Yoshimasa Kitagawa

Abstract read
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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Masayuki InubushiDivision of Nuclear Medicine, Department of Radiology, Kawasaki Medical School, Kurashiki, Okayama, Japan. inubushi@med.kawasaki-m.ac.jp.
Yasuto TakeuchiDivision of Cancer Cell Biology, Innovative Cancer Model Research Center, Cancer Research Institute of Kanazawa University, Kanazawa, Ishikawa, Japan.
Chika MuraiOral Diagnosis and Oral Medicine, Graduate School of Dental Medicine, Hokkaido University, Sapporo, Hokkaido, Japan.
Yoshimasa KitagawaOral Diagnosis and Oral Medicine, Graduate School of Dental Medicine, Hokkaido University, Sapporo, Hokkaido, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hypoxia is a hallmark of ischemic cardiovascular diseases and solid malignant tumors. Cellular hypoxia induces numerous physiological and pathological processes, including hematopoiesis, angiogenesis, metabolic changes, cell growth, and apoptosis. Hypoxia-inducible factor-1 (HIF-1) binds to hypoxia response elements (HREs) to selectively induce the expression of various genes in response to hypoxia. Therefore, HREs have been used to develop hypoxia-targeted gene therapy.More than 70 pairs of HREs and hypoxia-inducible genes have been identified. The hypoxia-induced gene expression levels vary among HRE sequences depending on the number of HRE copies and oxygen levels. Most known HREs have not yet been thoroughly studied. Recent studies have revealed that the HRE-mediated effects of hypoxia are cell line-dependent. Herein we describe an in vitro method to investigate gene activation levels and characteristics based on varying the copy number of HREs in response to cellular hypoxia. We explain how to clone HREs into luciferase reporter constructs in the sense, antisense, and dual directions to measure luciferase expression for functional analyses.

Indexed as

HypoxiaOxygenApoptosisCell HypoxiaHumansLuciferasesLuciferasesOxygenBioluminescenceCell cultureCellular hypoxiaFirefly luciferaseHypoxia response element (HRE)Molecular imagingRenilla luciferase

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.