Evidence map›Paper›PMID 38315345›Full record

ArticleJournal of imaging informatics in medicine2024

Development of Medical Imaging Data Standardization for Imaging-Based Observational Research: OMOP Common Data Model Extension.

Woo Yeon Park, Kyulee Jeon, Teri Sippel Schmidt, Haridimos Kondylakis, Tarik Alkasab, Blake E Dewey, Seng Chan You, Paul Nagy

Abstract read
In one paragraph

Article in Journal of imaging informatics in medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
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  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Recommendations for Standardizing Nuclear Medicine Terminology and Data in the Era of Theranostics and Artificial Intelligence.Journal of nuclear medicine : official publication, Society of Nuclear Medicine · 2025
    Article
  11. Article
  12. The march to harmonized imaging standards for retinal imaging.Progress in retinal and eye research · 2025
    Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Woo Yeon Park *Biomedical Informatics and Data Science, Johns Hopkins University, 855 N Wolfe St, Rangos 616, Baltimore, MD, USA. wpark11@jhu.edu.ORCID 0000-0001-9932-1485
Kyulee Jeon *Department of Biomedical Systems Informatics, Yonsei University College of Medicine, Seoul, Korea.ORCID 0009-0008-6338-5522
Teri Sippel SchmidtBiomedical Informatics and Data Science, Johns Hopkins University, 855 N Wolfe St, Rangos 616, Baltimore, MD, USA.ORCID 0009-0003-6092-7182
Haridimos KondylakisInstitute of Computer Science, Foundation of Research & Technology-Hellas (FORTH), Heraklion, Greece.ORCID 0000-0002-9917-4486
Tarik AlkasabDepartment of Radiology, Massachusetts General Hospital, Boston, MA, USA.ORCID 0000-0002-4433-9482
Blake E DeweyDepartment of Neurology, Johns Hopkins University, Baltimore, MD, USA.ORCID 0000-0003-4554-5058
Seng Chan YouDepartment of Biomedical Systems Informatics, Yonsei University College of Medicine, Seoul, Korea.ORCID 0000-0002-5052-6399
Paul NagyBiomedical Informatics and Data Science, Johns Hopkins University, 855 N Wolfe St, Rangos 616, Baltimore, MD, USA.ORCID 0000-0001-5108-7749

Funding

Johns Hopkins Training Program in Biomedical Informatics and Data ScienceT15LM013979 · NLM · JOHNS HOPKINS UNIVERSITY · PI CHRISTOPHER G CHUTE, Hadi Kharrazi · 2022 to 2026
$2.2M
NLM NIH HHS T15 LM013979
6 · The paper itself

Abstract

The rapid growth of artificial intelligence (AI) and deep learning techniques require access to large inter-institutional cohorts of data to enable the development of robust models, e.g., targeting the identification of disease biomarkers and quantifying disease progression and treatment efficacy. The Observational Medical Outcomes Partnership Common Data Model (OMOP CDM) has been designed to accommodate a harmonized representation of observational healthcare data. This study proposes the Medical Imaging CDM (MI-CDM) extension, adding two new tables and two vocabularies to the OMOP CDM to address the structural and semantic requirements to support imaging research. The tables provide the capabilities of linking DICOM data sources as well as tracking the provenance of imaging features derived from those images. The implementation of the extension enables phenotype definitions using imaging features and expanding standardized computable imaging biomarkers. This proposal offers a comprehensive and unified approach for conducting imaging research and outcome studies utilizing imaging features.

Indexed as

Common Data ElementsDiagnostic ImagingObservational Studies as TopicArtificial IntelligenceHumansData collection [MeSH]Data integrationData standardizationMultimodal data analysisObservational research

Identifiers

PMID38315345
PMCPMC11031512

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.