Evidence map›Paper›PMID 38314098›Full record

ArticleArchaea (Vancouver, B.C.)2023

Ribosomal Protein Cluster Organization in Asgard Archaea.

Madhan R Tirumalai, Raghavan V Sivaraman, Layla A Kutty, Eric L Song, George E Fox

Open access · hybridAbstract read
In one paragraph

Article in Archaea (Vancouver, B.C.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Education and public outreach: communicating science through storytelling.Journal of microbiology & biology education · 2024
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Madhan R TirumalaiDepartment of Biology and Biochemistry, University of Houston, Houston, TX 77204-5001, USA.ORCID 0000-0002-5999-333X
Raghavan V SivaramanSilver Lab, Wyss Institute for Biologically Inspired Engineering, Boston, MA, USA.ORCID 0009-0002-8442-5382
Layla A KuttyUniversity of Texas at Austin, Austin, TX, USA.ORCID 0009-0005-3596-6969
Eric L SongUniversity of Texas at Austin, Austin, TX, USA.ORCID 0009-0000-2215-8018
George E FoxDepartment of Biology and Biochemistry, University of Houston, Houston, TX 77204-5001, USA.ORCID 0000-0001-7767-8387
The University of Texas at Austin · USUniversity of Houston · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It has been proposed that the superphylum of Asgard Archaea may represent a historical link between the Archaea and Eukarya. Following the discovery of the Archaea, it was soon appreciated that archaeal ribosomes were more similar to those of Eukarya rather than Bacteria. Coupled with other eukaryotic-like features, it has been suggested that the Asgard Archaea may be directly linked to eukaryotes. However, the genomes of Bacteria and non-Asgard Archaea generally organize ribosome-related genes into clusters that likely function as operons. In contrast, eukaryotes typically do not employ an operon strategy. To gain further insight into conservation of the r-protein genes, the genome order of conserved ribosomal protein (r-protein) coding genes was identified in 17 Asgard genomes (thirteen complete genomes and four genomes with less than 20 contigs) and compared with those found previously in non-Asgard archaeal and bacterial genomes. A universal core of two clusters of 14 and 4 cooccurring r-proteins, respectively, was identified in both the Asgard and non-Asgard Archaea. The equivalent genes in the

Indexed as

ArchaeaRibosomal ProteinsBacteriaEscherichia coliGenome, BacterialPhylogenyRibosomal Proteins

Identifiers

PMID38314098
PMCPMC10833476
OpenAlexW4387159651

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.