Evidence map›Paper›PMID 38312708›Full record

ArticleHeliyon2024

Identification of cuproptosis-related molecular classification and characteristic genes in ulcerative colitis.

Xinyu Bai, Fengrui Zhang, Chan Zhou, Jingxian Yan, Hao Liang, Rui Zhu, Min Gong, Huixian Song, Junkun Niu, Yinglei Miao

Open access · goldAbstract read
In one paragraph

Article in Heliyon, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Xinyu BaiKunming Medical University, Kunming, China.
Fengrui ZhangDepartment of Gastroenterology, The First Affiliated Hospital of Kunming Medical University, Kunming, China.
Chan ZhouKunming Medical University, Kunming, China.
Jingxian YanKunming Medical University, Kunming, China.
Hao LiangKunming Medical University, Kunming, China.
Rui ZhuKunming Medical University, Kunming, China.
Min GongKunming Medical University, Kunming, China.
Huixian SongKunming Medical University, Kunming, China.
Junkun NiuDepartment of Gastroenterology, The First Affiliated Hospital of Kunming Medical University, Kunming, China.
Yinglei MiaoDepartment of Gastroenterology, The First Affiliated Hospital of Kunming Medical University, Kunming, China.
Kunming Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ulcerative colitis (UC) is a refractory inflammatory disease with imbalances in intestinal mucosal homeostasis. Cuproptosis serves as newly identified programmed cell death (PCD) form involved in UC. In the study, UC-related datasets were extracted from the Gene Expression Omnibus (GEO) database. A comparison of UC patients and healthy controls identified 11 differentially expressed cuproptosis-related genes (DE-CRGs), where FDX1, LIAS, and DLAT were differentially expressed in UC groups from the mouse models and clinical samples, with their expression correlating with disease severity. By comprehending weighted gene co-expression network analysis (WGCNA) and differential expression analysis, the key genes common to the module genes relevant to different cuproptosis-related clusters and differentially expressed genes (DEGs) both in different clusters and patients with and without UC were identified using several bioinformatic analysis. Furthermore, the mRNA levels of four characteristic genes with diagnostic potential demonstrated significant decrease in both mouse models and clinical UC samples. Our discoveries offer a theoretical foundation for cuproptosis effect in UC.

Indexed as

CuproptosisImmune infiltrationMachine learningMolecular clustersUlcerative colitis

Identifiers

PMID38312708
PMCPMC10835364
OpenAlexW4391057408

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.