Evidence map›Paper›PMID 38312213›Full record

ArticleOpen forum infectious diseases2024

Prevalence of Endemic Respiratory Viruses During the COVID-19 Pandemic in Urban and Rural Malawi.

Elen Vink, Louis Banda, Abena S Amoah, Stephen Kasenda, Jonathan M Read, Chris Jewell, Brigitte Denis, Annie Chauma Mwale, Amelia Crampin, Catherine Anscombe and 2 more

Open access · goldAbstract read
In one paragraph

Article in Open forum infectious diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Detection of community-acquired respiratory viruses during COVID-19 pandemic in subtropical region in Japan.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 3 countries.

Elen VinkMRC-University of Glasgow Centre for Virus Research, Glasgow, UK.ORCID https://orcid.org/0000-0001-8535-6214
Louis BandaMalawi Epidemiology and Intervention Research Unit, Lilongwe and Chilumba, Malawi.ORCID https://orcid.org/0000-0001-7108-5900
Abena S AmoahMalawi Epidemiology and Intervention Research Unit, Lilongwe and Chilumba, Malawi.ORCID https://orcid.org/0000-0003-2270-1871
Stephen KasendaMalawi Epidemiology and Intervention Research Unit, Lilongwe and Chilumba, Malawi.
Jonathan M ReadCentre for Health Information Computation and Statistics, Lancaster Medical School, Lancaster University, Lancaster, UK.ORCID https://orcid.org/0000-0002-9697-0962
Chris JewellDepartment of Mathematics and Statistics, Lancaster University, Lancaster, UK.ORCID https://orcid.org/0000-0002-7902-2178
Brigitte DenisMalawi-Liverpool-Wellcome Trust Clinical Research Programme, Blantyre, Malawi.
Annie Chauma MwalePublic Health Institute of Malawi, Lilongwe, Malawi.ORCID https://orcid.org/0000-0001-9914-7739
Amelia CrampinMalawi Epidemiology and Intervention Research Unit, Lilongwe and Chilumba, Malawi.ORCID https://orcid.org/0000-0002-1513-4330
Catherine AnscombeDepartment of Mathematics and Statistics, Lancaster University, Lancaster, UK.
Mavis MenyereMalawi-Liverpool-Wellcome Trust Clinical Research Programme, Blantyre, Malawi.ORCID https://orcid.org/0000-0001-7319-4318
Antonia HoMRC-University of Glasgow Centre for Virus Research, Glasgow, UK.ORCID https://orcid.org/0000-0003-1465-3785
University of Liverpool · GBLancaster University · GBMalawi Epidemiology and Intervention Research Unit · MWMRC University of Glasgow Centre for Virus Research · GBLeiden University Medical Center · NLLondon School of Hygiene & Tropical Medicine · GBPublic Health Institute of Malawi · MW

Funding

Medical Research Council MC_PC_19026Wellcome Trust
6 · The paper itself

Abstract

Background: We investigated endemic respiratory virus circulation patterns in Malawi, where no lockdown was imposed, during the COVID-19 pandemic. Methods: Within a prospective household cohort in urban and rural Malawi, adult participants provided upper respiratory tract (URT) samples at 4 time points between February 2021 and April 2022. Polymerase chain reaction (PCR) was performed for SARS-CoV-2, influenza, and other endemic respiratory viruses. Results: 1626 URT samples from 945 participants in 542 households were included. Overall, 7.6% (n = 123) samples were PCR- positive for >1 respiratory virus; SARS-CoV-2 (4.4%) and rhinovirus (2.0%) were most common. No influenza A virus was detected. Influenza B and respiratory syncytial virus (RSV) were rare. Higher virus positivity were detected in the rural setting and at earlier time points. Coinfections were infrequent. Conclusions: Endemic respiratory viruses circulated in the community in Malawi during the pandemic, though influenza and RSV were rarely detected. Distinct differences in virus positivity and demographics were observed between urban and rural cohorts.

Indexed as

community surveillanceCOVID-19epidemiologyMalawirespiratory viruses

Identifiers

PMID38312213
PMCPMC10836885
OpenAlexW4390028983

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.