Evidence map›Paper›PMID 38311573›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2024

Characterization of the Nucleus Pulposus Progenitor Cells via Spatial Transcriptomics.

Yu Chen, Long Zhang, Xueqing Shi, Jie Han, Jingyu Chen, Xinya Zhang, Danlin Xie, Zan Li, Xing Niu, Lijie Chen and 10 more

Open access · goldAbstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
9.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

  1. Pooled it
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  17. NJournal of orthopaedic translation · 2025
    Review
  18. Article
  19. Spatial transcriptomic applications in orthopedics.Connective tissue research · 2025
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 7 institutions in 2 countries.

Yu ChenThe First Affiliated Hospital of Xiamen University-ICMRS Collaborating Center for Skeletal Stem Cells, State Key Laboratory of Cellular Stress Biology, Faculty of Medicine and Life Sciences, School of Medicine, Xiamen University, Xiamen, 361102, China.
Long ZhangThe First Affiliated Hospital of Xiamen University-ICMRS Collaborating Center for Skeletal Stem Cells, State Key Laboratory of Cellular Stress Biology, Faculty of Medicine and Life Sciences, School of Medicine, Xiamen University, Xiamen, 361102, China.
Xueqing ShiThe First Affiliated Hospital of Xiamen University-ICMRS Collaborating Center for Skeletal Stem Cells, State Key Laboratory of Cellular Stress Biology, Faculty of Medicine and Life Sciences, School of Medicine, Xiamen University, Xiamen, 361102, China.
Jie HanThe First Affiliated Hospital of Xiamen University-ICMRS Collaborating Center for Skeletal Stem Cells, State Key Laboratory of Cellular Stress Biology, Faculty of Medicine and Life Sciences, School of Medicine, Xiamen University, Xiamen, 361102, China.
Jingyu ChenGene Denovo Biotechnology Co, Guangzhou, 510006, China.
Xinya ZhangSchool of Medicine and School of Biomedical Sciences, Huaqiao University, Quanzhou, 362000, China.
Danlin XieSchool of Medicine and School of Biomedical Sciences, Huaqiao University, Quanzhou, 362000, China.
Zan LiThe First Affiliated Hospital of Xiamen University-ICMRS Collaborating Center for Skeletal Stem Cells, State Key Laboratory of Cellular Stress Biology, Faculty of Medicine and Life Sciences, School of Medicine, Xiamen University, Xiamen, 361102, China.
Xing NiuChina Medical University, Shenyang, Liaoning, 110122, China.
Lijie ChenChina Medical University, Shenyang, Liaoning, 110122, China.
Chaoyong YangDepartment of Chemical Biology, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, 361005, China.
Xiujie SunDepartment of Obstetrics and Gynecology, School of Medicine, Xiang'an Hospital of Xiamen University, Xiamen University, Xiamen, 361102, China.
Taifeng ZhouDepartment of Spine Surgery, Guangdong Provincial Key Laboratory of Orthopedics and Traumatology, The First Affiliated Hospital of Sun Yat-sen University, Guangzhou, 510080, China.
Peiqiang SuDepartment of Spine Surgery, Guangdong Provincial Key Laboratory of Orthopedics and Traumatology, The First Affiliated Hospital of Sun Yat-sen University, Guangzhou, 510080, China.
Na LiThe First Affiliated Hospital of Xiamen University-ICMRS Collaborating Center for Skeletal Stem Cells, State Key Laboratory of Cellular Stress Biology, Faculty of Medicine and Life Sciences, School of Medicine, Xiamen University, Xiamen, 361102, China.
Matthew B GreenblattDepartment of Pathology and Laboratory Medicine, Weill Cornell Medical College, New York, NY, 10065, USA.
Rongqin KeSchool of Medicine and School of Biomedical Sciences, Huaqiao University, Quanzhou, 362000, China.
Jianming HuangDepartment of Orthopedics, Chengong Hospital (the 73th Group Military Hospital of People's Liberation Army) affiliated to Xiamen University, Xiamen, 361000, China.
Zhe-Sheng ChenCollege of Pharmacy and Health Sciences, St. John's University, New York, NY, 11439, USA.
Ren XuThe First Affiliated Hospital of Xiamen University-ICMRS Collaborating Center for Skeletal Stem Cells, State Key Laboratory of Cellular Stress Biology, Faculty of Medicine and Life Sciences, School of Medicine, Xiamen University, Xiamen, 361102, China.ORCID 0000-0001-6578-4553
Xiamen University · CNHuaqiao University · CNChina Medical University · CNSun Yat-sen University · CNHospital for Special Surgery · USSt. John's University · USVision Medicals (China) · CN

Funding

Fujian Natural Science Fund for Distinguished Young Scholars 2022J06003National Key Research and Development Program of China 2020YFA0112900National Natural Science Foundation of China 82002262National Natural Science Foundation of China 92068104Natural Science Foundation of Fujian Province 2020J05008Project of Xiamen Cell Therapy Research center 3502Z20214001
6 · The paper itself

Abstract

Loss of refreshment in nucleus pulposus (NP) cellularity leads to intervertebral disc (IVD) degeneration. Nevertheless, the cellular sequence of NP cell differentiation remains unclear, although an increasing body of literature has identified markers of NP progenitor cells (NPPCs). Notably, due to their fragility, the physical enrichment of NP-derived cells has limited conventional transcriptomic approaches in multiple studies. To overcome this limitation, a spatially resolved transcriptional atlas of the mouse IVD is generated via the 10x Genomics Visium platform dividing NP spots into two clusters. Based on this, most reported NPPC-markers, including Cathepsin K (Ctsk), are rare and predominantly located within the NP-outer subset. Cell lineage tracing further evidence that a small number of Ctsk-expressing cells generate the entire adult NP tissue. In contrast, Tie2, which has long suggested labeling NPPCs, is actually neither expressed in NP subsets nor labels NPPCs and their descendants in mouse models; consistent with this, an in situ sequencing (ISS) analysis validated the absence of Tie2 in NP tissue. Similarly, no Tie2-cre-mediated labeling of NPPCs is observed in an IVD degenerative mouse model. Altogether, in this study, the first spatial transcriptomic map of the IVD is established, thereby providing a public resource for bone biology.

Indexed as

Nucleus PulposusStem CellsTranscriptomeAnimalsCell DifferentiationDisease Models, AnimalGene Expression ProfilingIntervertebral Disc DegenerationMicenucleus pulposusspatial transcriptomics (ST)stem/progenitor celltervertebral disc degenerationTie2

Identifiers

PMID38311573
PMCPMC11095158
OpenAlexW4391537152

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.