Evidence map›Paper›PMID 38310297›Full record

ReviewBiomedical engineering online2024

Advantages of transformer and its application for medical image segmentation: a survey.

Qiumei Pu, Zuoxin Xi, Shuai Yin, Zhe Zhao, Lina Zhao

Abstract readReview
In one paragraph

Review in Biomedical engineering online, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Qiumei PuSchool of Information Engineering, Minzu University of China, Beijing, 100081, China.
Zuoxin XiSchool of Information Engineering, Minzu University of China, Beijing, 100081, China.
Shuai YinSchool of Information Engineering, Minzu University of China, Beijing, 100081, China.
Zhe ZhaoThe Fourth Medical Center of PLA General Hospital, Beijing, 100039, China.
Lina ZhaoCAS Key Laboratory for Biomedical Effects of Nanomaterials and Nanosafety Institute of High Energy Physics, Chinese Academy of Sciences, Beijing, 100049, China. linazhao@ihep.ac.cn.

Funding

Innovation Program for IHEP E35457U2National Key Research and Development Program of China 2020YFA0710700National Key Research and Development Program of China 2021YFA1200904National Natural Science Foundation of China 12375326National Natural Science Foundation of China 31971311
6 · The paper itself

Abstract

purposeConvolution operator-based neural networks have shown great success in medical image segmentation over the past decade. The U-shaped network with a codec structure is one of the most widely used models. Transformer, a technology used in natural language processing, can capture long-distance dependencies and has been applied in Vision Transformer to achieve state-of-the-art performance on image classification tasks. Recently, researchers have extended transformer to medical image segmentation tasks, resulting in good models.

methodsThis review comprises publications selected through a Web of Science search. We focused on papers published since 2018 that applied the transformer architecture to medical image segmentation. We conducted a systematic analysis of these studies and summarized the results.

resultsTo better comprehend the benefits of convolutional neural networks and transformers, the construction of the codec and transformer modules is first explained. Second, the medical image segmentation model based on transformer is summarized. The typically used assessment markers for medical image segmentation tasks are then listed. Finally, a large number of medical segmentation datasets are described.

conclusionEven if there is a pure transformer model without any convolution operator, the sample size of medical picture segmentation still restricts the growth of the transformer, even though it can be relieved by a pretraining model. More often than not, researchers are still designing models using transformer and convolution operators.

Indexed as

Natural Language ProcessingNeural Networks, ComputerImage Processing, Computer-AssistedTechnologyCodecDeep learningMedical imageSegmentationTransformer

Identifiers

PMID38310297
PMCPMC10838005

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.