Evidence map›Paper›PMID 38307019›Full record

ArticleCell host & microbe2024

Evolution of human H3N2 influenza virus receptor specificity has substantially expanded the receptor-binding domain site.

Andrew J Thompson, Nicholas C Wu, Angeles Canales, Chika Kikuchi, Xueyong Zhu, Beatriz Fernández de Toro, Francisco J Cañada, Charli Worth, Shengyang Wang, Ryan McBride and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell host & microbe, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
13.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 35 citations in OpenAlex.

  1. Pooled it
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  6. Loss of hemagglutination ability by H3N2 influenza A virus, subclade K.bioRxiv : the preprint server for biology · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 2 countries.

Andrew J ThompsonDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Nicholas C WuDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Angeles CanalesDepartment of Organic Chemistry, Faculty of Chemistry, Universidad Complutense de Madrid, Avd. Complutense s/n, 28040 Madrid, Spain.
Chika KikuchiDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Xueyong ZhuDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Beatriz Fernández de ToroStructural and Chemical Biology Department, Centro de Investigaciones Biológicas Margarita Salas, C/Ramiro de Maeztu 9, 28040 Madrid, Spain.
Francisco J CañadaStructural and Chemical Biology Department, Centro de Investigaciones Biológicas Margarita Salas, C/Ramiro de Maeztu 9, 28040 Madrid, Spain; CIBERES, ISCIII, 28029 Madrid, Spain.
Charli WorthDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Shengyang WangDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Ryan McBrideDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Wenjie PengDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Corwin M NycholatDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Jesús Jiménez-BarberoCIBERES, ISCIII, 28029 Madrid, Spain; CIC bioGUNE Bizkaia Science and Technology Park, 48160 Bilbao, Spain; IKERBASQUE, Basque Foundation for Science, 48009 Bilbao, Spain.
Ian A WilsonDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, USA. Electronic address: wilson@scripps.edu.
James C PaulsonDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA; Department of Immunology & Microbiology, The Scripps Research Institute, La Jolla, CA 92037, USA. Electronic address: jpaulson@scripps.edu.
Scripps Research Institute · USCentro de Investigaciones Biológicas Margarita Salas · ESIkerbasque · ESInstituto de Salud Carlos III · ESUniversidad Complutense de Madrid · ES

Funding

NIAID Centers of Excellence for Influenza Research and Response: Universal Influenza Vaccine Research Activities75N93021C00015 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI HENSLEY, SCOTT · 2021 to 2025
$50.7M
Influenza virus receptors on human airway epithelial cellsR01AI114730 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI PAULSON, JAMES C · 2015 to 2023
$5.1M
NIAID NIH HHS 75N93021C00015NIAID NIH HHS R01 AI114730
6 · The paper itself

Abstract

Hemagglutinins (HAs) from human influenza viruses descend from avian progenitors that bind α2-3-linked sialosides and must adapt to glycans with α2-6-linked sialic acids on human airway cells to transmit within the human population. Since their introduction during the 1968 pandemic, H3N2 viruses have evolved over the past five decades to preferentially recognize human α2-6-sialoside receptors that are elongated through addition of poly-LacNAc. We show that more recent H3N2 viruses now make increasingly complex interactions with elongated receptors while continuously selecting for strains maintaining this phenotype. This change in receptor engagement is accompanied by an extension of the traditional receptor-binding site to include residues in key antigenic sites on the surface of HA trimers. These results help explain the propensity for selection of antigenic variants, leading to vaccine mismatching, when H3N2 viruses are propagated in chicken eggs or cells that do not contain such receptors.

Indexed as

Influenza A Virus, H3N2 SubtypeInfluenza, HumanAnimalsChickensHemagglutinin Glycoproteins, Influenza VirusHumansPolysaccharidesReceptors, VirusSialic AcidsHemagglutinin Glycoproteins, Influenza VirusPolysaccharidesReceptors, VirusSialic AcidsepistasisglycanH3N2hemagglutininhost adaptationhumaninfluenzareceptorreceptor-binding sitesialic acid

Identifiers

PMID38307019
PMCPMC11057904
OpenAlexW4391450132

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.