Evidence map›Paper›PMID 38305398›Full record

ArticleCombinatorial chemistry & high throughput screening2024

The Transcriptome Analysis of Circular RNAs Between the Doxorubicin- Induced Cardiomyocytes and Bone Marrow Mesenchymal Stem Cells- Derived Exosomes Treated Ones.

Yanhuan Wei, Haixia Wei, Chao Tian, Qinchao Wu, Daisong Li, Chao Huang, Guoliang Zhang, Ruolan Chen, Ni Wang, Yonghong Li and 2 more

Abstract read
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In one paragraph

Article in Combinatorial chemistry & high throughput screening, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Review
4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Yanhuan WeiDepartment of Cardiology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Haixia WeiQingdao Chengyang People's Hospital, Qingdao, China.
Chao TianHepatopancreatobiliary Center, Beijing Tsinghua Changgung Hospital, School of Clinical Medicine, Tsinghua University, Beijing, China.
Qinchao WuDepartment of Cardiology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Daisong LiDepartment of Cardiology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Chao HuangDepartment of Cardiology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Guoliang ZhangDepartment of Cardiology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Ruolan ChenDepartment of Cardiology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Ni WangDepartment of Cardiology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Yonghong LiDepartment of Cardiology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Bing LiDepartment of Genetics, Basic Medicine School, Qingdao University, Qingdao, China.
Xian-Ming ChuDepartment of Cardiology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Qingdao University · CNBeijing Tsinghua Chang Gung Hospital · CN

Funding

National Natural Science Foundation of China 82172574, 81871231Natural Science Foundation of Shandong Province ZR2020MH016Project of China Association of Chinese Medicine 2021HH-006Project of Clinical Medicine + X in Affiliated Hospital of Qingdao University QDFY+X2021051Qingdao Medical and Health Research 2022-WJZD182Research Planning Project of Shandong Higher Medical Education Research Center YJKT202171Science and Technology Research Program of Shandong Geriatric Association LKJGG2021W076Shandong Chinese Medicine Science and Technology Project 2021M164Youth Innovation and Science and Technology Plan of Colleges and Universities in Shandong Province 2019KJK016
6 · The paper itself

Abstract

aimTo analyze the sequencing results of circular RNAs (circRNAs) in cardiomyocytes between the doxorubicin (DOX)-injured group and exosomes treatment group. Moreover, to offer potential circRNAs possibly secreted by exosomes mediating the therapeutic effect on DOX-induced cardiotoxicity for further study.

methodsThe DOX-injured group (DOX group) of cardiomyocytes was treated with DOX, while an exosomes-treated group of injured cardiomyocytes were cocultured with bone marrow mesenchymal stem cells (BMSC)-derived exosomes (BEC group). The high-throughput sequencing of circRNAs was conducted after the extraction of RNA from cardiomyocytes. The differential expression of circRNA was analyzed after identifying the number, expression, and conservative of circRNAs. Then, the target genes of differentially expressed circRNAs were predicted based on the targetscan and Miranda database. Next, the GO and KEGG enrichment analyses of target genes of circRNAs were performed. The crucial signaling pathways participating in the therapeutic process were identified. Finally, a real-time quantitative polymerase chain reaction experiment was conducted to verify the results obtained by sequencing.

resultsThirty-two circRNAs are differentially expressed between the two groups, of which twenty-three circRNAs were elevated in the exosomes-treated group (BEC group). The GO analysis shows that target genes of differentially expressed circRNAs are mainly enriched in the intracellular signalactivity, regulation of nucleic acid-templated transcription, Golgi-related activity, and GTPase activator activity. The KEGG analysis displays that they were involved in the autophagy biological process and NOD-like receptor signaling pathway. The verification experiment suggested that mmu_circ_0000425 (ID: 116324210) was both decreased in the DOX group and elevated in BEC group, which was consistent with the result of sequencing.

conclusionmmu_circ_0000425 in exosomes derived from bone marrow mesenchymal stem cells (BMSC) may have a therapeutic role in alleviating doxorubicin-induced cardiotoxicity (DIC).

Indexed as

DoxorubicinExosomesMesenchymal Stem CellsMyocytes, CardiacRNA, CircularAnimalsCells, CulturedGene Expression ProfilingRatsDoxorubicinRNA, Circularcardiotoxicitycircular RNADoxorubicinexosomenon-coding RNA.transcriptome analysis

Identifiers

PMID38305398
OpenAlexW4391487695

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.