Evidence map›Paper›PMID 38304080›Full record

ArticleISME communications2024

Genome-wide assessment of genetic diversity and transcript variations in 17 accessions of the model diatom

Timothée Chaumier, Feng Yang, Eric Manirakiza, Ouardia Ait-Mohamed, Yue Wu, Udita Chandola, Bruno Jesus, Gwenael Piganeau, Agnès Groisillier, Leila Tirichine

Open access · goldAbstract read
In one paragraph

Article in ISME communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Diatom triacylglycerol metabolism: from carbon fixation to lipid droplet degradation.Biological reviews of the Cambridge Philosophical Society · 2025
    Review
  6. Article
  7. Article
  8. Comparative RNA-Seq of TenMarine drugs · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Timothée ChaumierNantes Université, CNRS, US2B, UMR 6286, Nantes F-44000, France.
Feng YangNantes Université, CNRS, US2B, UMR 6286, Nantes F-44000, France.
Eric ManirakizaNantes Université, CNRS, US2B, UMR 6286, Nantes F-44000, France.
Ouardia Ait-MohamedImmunity and Cancer Department, Institut Curie, PSL Research University, INSERM U932, Paris 75005, France.
Yue WuNantes Université, CNRS, US2B, UMR 6286, Nantes F-44000, France.
Udita ChandolaNantes Université, CNRS, US2B, UMR 6286, Nantes F-44000, France.
Bruno JesusInstitut des Substances et Organismes de la Mer, ISOMer, Nantes Université, UR 2160, Nantes F-44000, France.
Gwenael PiganeauSorbonne Université, CNRS, Laboratoire de Biodiversité et Biotechnologies Microbiennes, LBBM, F-66650 Banyuls-sur-Mer, France.
Agnès GroisillierNantes Université, CNRS, US2B, UMR 6286, Nantes F-44000, France.
Leila TirichineNantes Université, CNRS, US2B, UMR 6286, Nantes F-44000, France.
Centre National de la Recherche Scientifique · FRUnité en Sciences Biologiques et Biotechnologies de NantesNantes Université · FRInserm · FRLaboratoire de Biodiversité et Biotechnologies Microbiennes · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Diatoms, a prominent group of phytoplankton, have a significant impact on both the oceanic food chain and carbon sequestration, thereby playing a crucial role in regulating the climate. These highly diverse organisms show a wide geographic distribution across various latitudes. In addition to their ecological significance, diatoms represent a vital source of bioactive compounds that are widely used in biotechnology applications. In the present study, we investigated the genetic and transcriptomic diversity of 17 accessions of the model diatom

Indexed as

diatomsdiversityecologyevolutiongeneticheterozygosityPhaeodactylum tricornutumselectiontranscriptomic

Identifiers

PMID38304080
PMCPMC10833087
OpenAlexW4390704430

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.