Evidence map›Paper›PMID 38302992›Full record

ArticleJournal of hematology & oncology2024

METTL16 promotes liver cancer stem cell self-renewal via controlling ribosome biogenesis and mRNA translation.

Meilin Xue, Lei Dong, Honghai Zhang, Yangchan Li, Kangqiang Qiu, Zhicong Zhao, Min Gao, Li Han, Anthony K N Chan, Wei Li and 25 more

Open access · goldAbstract read
In one paragraph

Article in Journal of hematology & oncology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
16.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 72 citations in OpenAlex.

  1. Article
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  6. Cuproptosis: potential new direction in liver-related diseases research and treatment.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2026
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  10. MOncogene · 2026
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  12. Filgotinib inhibits METTL3-mediated mNPJ precision oncology · 2026
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  15. METTL16-mediated mJournal of experimental & clinical cancer research : CR · 2026
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  16. Review
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  18. Review
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  20. Review

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors at 7 institutions in 2 countries.

Meilin Xue *Department of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Lei Dong *Department of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Honghai Zhang *Department of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Yangchan LiDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Kangqiang QiuDepartment of Cancer Biology, University of Cincinnati College of Medicine, Cincinnati, OH, 45267, USA.
Zhicong ZhaoDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Min GaoDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Li HanDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Anthony K N ChanDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Wei LiDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Keith LeungDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Kitty WangDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Sheela Pangeni PokharelDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Ying QingDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Wei LiuDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Xueer WangDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Lili RenDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Hongjie BiDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Lu YangDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Chao ShenDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Zhenhua ChenDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Laleh MelstromDivision of Surgical Oncology, Department of Surgery, Beckman Research Institute of City of Hope Comprehensive Cancer Center, Duarte, CA, 91010, USA.
Hongzhi LiDepartment of Molecular Medicine, City of Hope National Medical Center, Duarte, CA, 91016, USA.
Nikolai TimchenkoDivision of General and Thoracic Surgery, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, 45229, USA.
Xiaolan DengDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Wendong HuangDepartment of Diabetes Complications and Metabolism, Diabetes and Metabolism Research Institute, Beckman Research Institute of City of Hope, Duarte, CA, 91010, USA.
Steven T RosenCity of Hope Comprehensive Cancer Center, City of Hope, Duarte, CA, 91010, USA.
Jingyan TianState Key Laboratory of Medical Genomics, Clinical Trial Center, Shanghai Institute of Endocrine and Metabolic Diseases, Department of Endocrinology and Metabolism, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, 200025, China.
Lin XuQuantitative Biomedical Research Center, Peter O'Donnell Jr. School of Public Health, UT Southwestern Medical Center, Dallas, TX, 7539, USA.
Jiajie DiaoDepartment of Cancer Biology, University of Cincinnati College of Medicine, Cincinnati, OH, 45267, USA.
Chun-Wei ChenDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Jianjun ChenDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA.
Baiyong ShenDepartment of General Surgery, Pancreatic Disease Center, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, 200025, China. shenby@shsmu.edu.cn.
Hao ChenDepartment of General Surgery, Pancreatic Disease Center, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, 200025, China. haochendr@126.com.
Rui SuDepartment of Systems Biology, Beckman Research Institute of City of Hope, Monrovia, CA, 91016, USA. rsu@coh.org.
City of Hope · USBeckman Research InstituteRuijin Hospital · CNShanghai Jiao Tong University · CNUniversity of Cincinnati Medical Center · USCincinnati Children's Hospital Medical Center · USCity Of Hope National Medical Center · US

Funding

The role and therapeutic potential of IGF2BP2 in MLL-rearranged leukemiaR01CA271497 · NCI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI Jianjun Chen · 2022 to 2026
$2.8M
Targeting FTO to treat acute myeloid leukemiaR01CA243386 · NCI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI CHEN, JIANJUN · 2020 to 2024
$2.8M
Combinational Targeting the Feed-forward Epigenetic Circuitry in Mixed Lineage LeukemiaR37CA233691 · NCI · MAYO CLINIC ROCHESTER · PI CHEN, CHUN-WEI DAVID · 2019 to 2025
$2.8M
TET2-mediated epitranscriptomic regulation in leukemia microenvironmentR01CA280389 · NCI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI Jianjun Chen · 2023 to 2026
$2.7M
The role and mechanism of METTL3/METTL14-mediated RNA modification in the pathogenesis and drug-resistance of AMLR01CA236399 · NCI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI CHEN, JIANJUN · 2019 to 2023
$2.3M
Role of BAZ2A in MLL-r leukemia and therapeutic responseR01CA236626 · NCI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI CHEN, CHUN-WEI DAVID · 2019 to 2023
$2.2M
The function and underlying mechanism of TET1 in myelodysplastic syndromesR01DK124116 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI CHEN, JIANJUN · 2020 to 2023
$2.2M
NCI NIH HHS R01 CA236399NCI NIH HHS R01 CA236626NCI NIH HHS R01 CA243386NCI NIH HHS R01 CA271497NCI NIH HHS R01 CA280389NCI NIH HHS R37 CA233691NIDDK NIH HHS R01 DK124116
6 · The paper itself

Abstract

backgroundWhile liver cancer stem cells (CSCs) play a crucial role in hepatocellular carcinoma (HCC) initiation, progression, recurrence, and treatment resistance, the mechanism underlying liver CSC self-renewal remains elusive. We aim to characterize the role of Methyltransferase 16 (METTL16), a recently identified RNA N

methodsLiver-specific Mettl16 conditional KO (cKO) mice were generated to assess its role in HCC pathogenesis and normal hepatogenesis. Hydrodynamic tail-vein injection (HDTVi)-induced de novo hepatocarcinogenesis and xenograft models were utilized to determine the role of METTL16 in HCC initiation and progression. A limiting dilution assay was utilized to evaluate CSC frequency. Functionally essential targets were revealed via integrative analysis of multi-omics data, including RNA-seq, RNA immunoprecipitation (RIP)-seq, and ribosome profiling.

resultsMETTL16 is highly expressed in liver CSCs and its depletion dramatically decreased CSC frequency in vitro and in vivo. Mettl16 KO significantly attenuated HCC initiation and progression, yet only slightly influenced normal hepatogenesis. Mechanistic studies, including high-throughput sequencing, unveiled METTL16 as a key regulator of ribosomal RNA (rRNA) maturation and mRNA translation and identified eukaryotic translation initiation factor 3 subunit a (eIF3a) transcript as a bona-fide target of METTL16 in HCC. In addition, the functionally essential regions of METTL16 were revealed by CRISPR gene tiling scan, which will pave the way for the development of potential inhibitor(s).

conclusionsOur findings highlight the crucial oncogenic role of METTL16 in promoting HCC pathogenesis and enhancing liver CSC self-renewal through augmenting mRNA translation efficiency.

Indexed as

Carcinoma, HepatocellularLiver NeoplasmsNeoplastic Stem CellsAnimalsCell Line, TumorCell Self RenewalHumansMethyltransferasesMiceProtein BiosynthesisRibosomesRNAMethyltransferasesMETTL16 protein, humanRNACancer stem cellseIF3aHepatocellular carcinomaMETTL16mRNA translationN6-methyladenosineRibosome biogenesisSelf-renewal

Identifiers

PMID38302992
PMCPMC10835888
OpenAlexW4391431353

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.