Evidence map›Paper›PMID 38302537›Full record

ArticleScientific reports2024

The NMR structure of the Ea22 lysogenic developmental protein from lambda bacteriophage.

Cameron Goddard, Bożena Nejman-Faleńczyk, Logan W Donaldson

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Cameron GoddardDepartment of Biology, York University, Toronto, ON, M3J1P3, Canada.
Bożena Nejman-FaleńczykDepartment of Molecular Biology, University of Gdańsk, 80-308, Gdańsk, Poland.
Logan W DonaldsonDepartment of Biology, York University, Toronto, ON, M3J1P3, Canada. logand@yorku.ca.

Funding

Narodowym Centrum Nauki UMO-2018/30/E/NZ1/00400Natural Sciences and Engineering Research Council of Canada 2018-05838
6 · The paper itself

Abstract

The ea22 gene resides in a relatively uncharacterized region of the lambda bacteriophage genome between the exo and xis genes and is among the earliest genes transcribed upon infection. In lambda and Shiga toxin-producing phages found in enterohemorrhagic E. coli (EHEC) associated with food poisoning, Ea22 favors a lysogenic over lytic developmental state. The Ea22 protein may be considered in terms of three domains: a short amino-terminal domain, a coiled-coiled domain, and a carboxy-terminal domain (CTD). While the full-length protein is tetrameric, the CTD is dimeric when expressed individually. Here, we report the NMR solution structure of the Ea22 CTD that is described by a mixed alpha-beta fold with a dimer interface reinforced by salt bridges. A conserved mobile loop may serve as a ligand for an unknown host protein that works with Ea22 to promote bacterial survival and the formation of new lysogens. From sequence and structural comparisons, the CTD distinguishes lambda Ea22 from homologs encoded by Shiga toxin-producing bacteriophages.

Indexed as

BacteriophagesEnterohemorrhagic Escherichia coliEscherichia coli InfectionsBacteriophage lambdaHumansLysogenyShiga ToxinShiga Toxin

Identifiers

PMID38302537
PMCPMC10834534

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.