Evidence map›Paper›PMID 38301647›Full record

ArticleNeuron2024

APOE loss-of-function variants: Compatible with longevity and associated with resistance to Alzheimer's disease pathology.

Augustine Chemparathy, Yann Le Guen, Sunny Chen, Eun-Gyung Lee, Lesley Leong, John E Gorzynski, Tanner D Jensen, Alexis Ferrasse, Guangxue Xu, Hong Xiang and 18 more

Open access · bronzeAbstract read
In one paragraph

Article in Neuron, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 1 pooled it
8.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 1 synthesis or guideline pooled it, 37 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Deletion of neuronal Idol ameliorates Alzheimer's disease-related pathologies via APOE receptors.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
    Article
  8. Health effects of loss of function variants in gene targets for Alzheimer's disease prevention.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2025
    Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Review
  14. Review
  15. APOE4 carriers display loss of anticipatory cerebrovascular regulation across the Alzheimer's disease continuum.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
    Article
  16. Review
  17. Suppressing APOE4-induced neural pathologies by targeting the VHL-HIF axis.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

  • Update of
    2023
5 · Who and what money

Authors and funding

28 authors at 7 institutions in 2 countries.

Augustine ChemparathyDepartment of Neurology and Neurological Sciences, Stanford University, Stanford, CA, USA.
Yann Le GuenDepartment of Neurology and Neurological Sciences, Stanford University, Stanford, CA, USA; Quantitative Sciences Unit, Department of Medicine, Stanford University, Stanford, CA, USA.
Sunny ChenGeriatric Research, Education, and Clinical Center, VA Puget Sound Health Care System, Seattle, WA, USA.
Eun-Gyung LeeGeriatric Research, Education, and Clinical Center, VA Puget Sound Health Care System, Seattle, WA, USA.
Lesley LeongGeriatric Research, Education, and Clinical Center, VA Puget Sound Health Care System, Seattle, WA, USA.
John E GorzynskiDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA.
Tanner D JensenDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA.
Alexis FerrasseDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA.
Guangxue XuDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA.
Hong XiangDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA.
Michael E BelloyDepartment of Neurology and Neurological Sciences, Stanford University, Stanford, CA, USA.
Nandita KasireddyDepartment of Neurology and Neurological Sciences, Stanford University, Stanford, CA, USA.
Andrés Peña-TauberDepartment of Neurology and Neurological Sciences, Stanford University, Stanford, CA, USA.
Kennedy WilliamsDepartment of Neurology and Neurological Sciences, Stanford University, Stanford, CA, USA.
Ilaria StewartDepartment of Neurology and Neurological Sciences, Stanford University, Stanford, CA, USA.
Lia TalozziDepartment of Neurology and Neurological Sciences, Stanford University, Stanford, CA, USA.
Thomas S WingoEmory University School of Medicine, Atlanta, GA, USA; Goizueta Alzheimer's Disease Center, Emory University School of Medicine, Atlanta, GA, USA.
James J LahDepartment of Neurology, Emory University School of Medicine, Atlanta, GA, USA.
Suman JayadevDepartment of Neurology, University of Washington, Seattle, WA, USA.
Chadwick M HalesDepartment of Neurology, Emory University School of Medicine, Atlanta, GA, USA; Department of Neurology, University of Washington, Seattle, WA, USA.
Elaine PeskindVeterans Affairs Northwest Network Mental Illness Research, Education, and Clinical Center, Veteran Affairs Puget Sound Health Care System, Seattle, WA, USA; Department of Psychiatry and Behavioral Sciences, University of Washington, Seattle, WA, USA.
Daniel D ChildDepartment of Laboratory Medicine and Pathology, University of Washington School of Medicine, Seattle, WA, USA.
Sigrun RoeberCenter for Neuropathology and Prion Research, Faculty of Medicine, LMU Munich, Munich, Germany.
C Dirk KeeneDepartment of Laboratory Medicine and Pathology, University of Washington School of Medicine, Seattle, WA, USA.
Le CongDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA.
Euan A AshleyDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA; Center for Inherited Cardiovascular Disease, Stanford University, Stanford, CA, USA; Division of Cardiology, Department of Medicine, Stanford University School of Medicine, Stanford, CA, USA.
Chang-En YuGeriatric Research, Education, and Clinical Center, VA Puget Sound Health Care System, Seattle, WA, USA; Department of Medicine, University of Washington, Seattle, WA, USA.
Michael D GreiciusDepartment of Neurology and Neurological Sciences, Stanford University, Stanford, CA, USA. Electronic address: greicius@stanford.edu.
Stanford University · USUniversity of Washington · USEmory University · USGeriatric Research Education and Clinical Center · USVA Puget Sound Health Care System · USLudwig-Maximilians-Universität München · DEUniversity of Puget Sound · US

Funding

National Centralized Repository for Alzheimer's Disease and Related Dementias (NCRAD)U24AG021886 · NIA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI TATIANA M. FOROUD · 2002 to 2026
$119.8M
Translational pharmacoepidemiology: neuroprotection and neurotoxicity of antihypertensives and strong anticholinergicsU19AG066567 · NIA · KAISER FOUNDATION RESEARCH INSTITUTE · PI CHRISTOPHER DIRK KEENE · 2021 to 2026
$80.4M
INSTITUTIONAL TRAINING GRANT IN GENOME SCIENCET32HG000044 · NHGRI · STANFORD UNIVERSITY · PI MICHAEL P. SNYDER · 1995 to 2026
$32.2M
University of Washington Alzheimer's Disease Research CenterP30AG066509 · NIA · UNIVERSITY OF WASHINGTON · PI Thomas J. Grabowski · 2020 to 2026
$29.0M
The Goizueta Alzheimer's Disease Research CenterP30AG066511 · NIA · EMORY UNIVERSITY · PI Amy D Rodriguez · 2020 to 2026
$29.0M
Stanford Alzheimer's Disease Research CenterAdmin Supp: Developing iPSC models for AD and PDP30AG066515 · NIA · STANFORD UNIVERSITY · PI ELIZABETH MORMINO · 2020 to 2026
$29.0M
Social Determinants of Health, Race/Ethnicity, and White Matter HyperintensitiesP30AG066506 · NIA · UNIVERSITY OF FLORIDA · PI David E Vaillancourt · 2020 to 2026
$25.6M
UC Davis Alzheimer's Disease Research CenterP30AG072972 · NIA · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Charles DeCarli, Rachel A Whitmer · 2021 to 2026
$25.2M
Neurobehavior, Neuropathology, and Risk Factors in Alzheimer's DiseaseT32AG052354 · NIA · UNIVERSITY OF WASHINGTON · PI Brian C. Kraemer, ELAINE R. PESKIND · 2016 to 2026
$6.7M
Illuminating the APOE Locus with Long-Read Sequencing and Targeted GenomicsR35AG072290 · NIA · STANFORD UNIVERSITY · PI GREICIUS, MICHAEL D · 2021 to 2025
$4.6M
The Stanford Extreme Phenotypes in Alzheimer's Disease (StEP AD) CohortR01AG060747 · NIA · STANFORD UNIVERSITY · PI GREICIUS, MICHAEL D · 2018 to 2022
$3.4M
Recombineering-based no-cleavage gene-editing toolkit for large-scale genome engineering and functional screeningR01GM141627 · NIGMS · STANFORD UNIVERSITY · PI Le Cong · 2021 to 2026
$3.3M
BLRD VA I01 BX000933BLRD VA I01 BX004823NHGRI NIH HHS R35 HG011316NHGRI NIH HHS T32 HG000044NIA NIH HHS K99 AG075238NIA NIH HHS P30 AG066506NIA NIH HHS P30 AG066509NIA NIH HHS P30 AG066511NIA NIH HHS P30 AG066515NIA NIH HHS P30 AG072972NIA NIH HHS R00 AG075238NIA NIH HHS R01 AG060747NIA NIH HHS R35 AG072290NIA NIH HHS T32 AG052354NIA NIH HHS U19 AG066567NIA NIH HHS U24 AG021886NIGMS NIH HHS R01 GM141627
6 · The paper itself

Abstract

The ε4 allele of apolipoprotein E (APOE) is the strongest genetic risk factor for sporadic Alzheimer's disease (AD). Knockdown of ε4 may provide a therapeutic strategy for AD, but the effect of APOE loss of function (LoF) on AD pathogenesis is unknown. We searched for APOE LoF variants in a large cohort of controls and patients with AD and identified seven heterozygote carriers of APOE LoF variants. Five carriers were controls (aged 71-90 years), one carrier was affected by progressive supranuclear palsy, and one carrier was affected by AD with an unremarkable age at onset of 75 years. Two APOE ε3/ε4 controls carried a stop-gain affecting ε4: one was cognitively normal at 90 years and had no neuritic plaques at autopsy; the other was cognitively healthy at 79 years, and lumbar puncture at 76 years showed normal levels of amyloid. These results suggest that ε4 drives AD risk through the gain of abnormal function and support ε4 knockdown as a viable therapeutic option.

Indexed as

Alzheimer DiseaseAllelesApolipoprotein E4Apolipoproteins EGenotypeHumansLongevityApoE protein, humanApolipoprotein E4Apolipoproteins EAlzheimer’s diseaseapolipoprotein Edementiahuman geneticslong-read sequencingloss of functionneurodegenerative disordersstructural variant

Identifiers

PMID38301647
PMCPMC10994769
OpenAlexW4391420434

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.