Evidence map›Paper›PMID 38300873›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Targeted demethylation and activation of

Xin Sun, Toshiyuki Watanabe, Yoshitaka Oda, Weidong Shen, Alaa Ahmad, Ryota Ouda, Paul de Figueiredo, Hidemitsu Kitamura, Shinya Tanaka, Koichi S Kobayashi

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Xin SunDepartment of Immunology, Graduate School of Medicine, Hokkaido University, Sapporo 060-8638, Japan.ORCID 0000-0002-0234-3571
Toshiyuki WatanabeDepartment of Immunology, Graduate School of Medicine, Hokkaido University, Sapporo 060-8638, Japan.
Yoshitaka OdaDepartment of Cancer Pathology, Graduate School of Medicine, Hokkaido University, Hokkaido, Sapporo 060-8638, Japan.
Weidong ShenDivision of Functional Immunology, Section of Disease Control, Institute for Genetic Medicine, Hokkaido University, Sapporo 060-8638, Japan.
Alaa AhmadDepartment of Immunology, Graduate School of Medicine, Hokkaido University, Sapporo 060-8638, Japan.
Ryota OudaDepartment of Immunology, Graduate School of Medicine, Hokkaido University, Sapporo 060-8638, Japan.
Paul de FigueiredoDepartment of Microbial Pathogenesis and Immunology, Texas A&M Health Science Center, Bryan, TX 77807.
Hidemitsu KitamuraDivision of Functional Immunology, Section of Disease Control, Institute for Genetic Medicine, Hokkaido University, Sapporo 060-8638, Japan.ORCID 0000-0001-7006-6767
Shinya TanakaDepartment of Cancer Pathology, Graduate School of Medicine, Hokkaido University, Hokkaido, Sapporo 060-8638, Japan.ORCID 0000-0001-6470-3301
Koichi S KobayashiDepartment of Immunology, Graduate School of Medicine, Hokkaido University, Sapporo 060-8638, Japan.ORCID 0000-0003-2930-0114
Hokkaido University · JPTexas A&M Health Science Center · USToyo University · JP

Funding

BMS | Bristol-Myers Squibb Canada (BMS) not applicableDX Doctoral Fellowship PH8D220001DX Doctoral Fellowship PH8D220009Hitachi Global Foundation not applicableJapan Agency for Medical Research and Development (AMED) 23ym0126801j0002Japan Agency for Medical Research and Development (AMED) JP223fa627005Kobayashi Foundation not applicableMEXT | Japan Science and Technology Agency (JST) JPMJST2284MEXT | Japan Society for the Promotion of Science (JSPS) 19K16681MEXT | Japan Society for the Promotion of Science (JSPS) 19K21250MEXT | Japan Society for the Promotion of Science (JSPS) 20K16433MEXT | Japan Society for the Promotion of Science (JSPS) 20K21511MEXT | Japan Society for the Promotion of Science (JSPS) 22H02883MEXT | Japan Society for the Promotion of Science (JSPS) 22KK0112SENSHIN Medical Research Foundation (SMRF) not applicableTakeda Science Foundation (TSF) not applicableToyo Suisan Foundation (THE TOYO SUISAN FOUNDATION) not applicable
6 · The paper itself

Abstract

Impaired expression of MHC (major histocompatibility complex) class I in cancers constitutes a major mechanism of immune evasion. It has been well documented that the low level of MHC class I is associated with poor prognosis and resistance to checkpoint blockade therapies. However, there is lmited approaches to specifically induce MHC class I to date. Here, we show an approach for robust and specific induction of MHC class I by targeting an MHC class I transactivator (CITA)/NLRC5, using a CRISPR/Cas9-based gene-specific system, designated TRED-I (Targeted reactivation and demethylation for MHC-I). The TRED-I system specifically recruits a demethylating enzyme and transcriptional activators on the

Indexed as

Genes, MHC Class INeoplasmsAnimalsDemethylationHistocompatibility Antigens Class ITrans-ActivatorsHistocompatibility Antigens Class ITrans-Activatorsantigen presentationcancer immunotherapyepigenetic modificationimmune checkpoint blockadeMHC-I

Identifiers

PMID38300873
PMCPMC10861931
OpenAlexW4391423461

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.