Evidence map›Paper›PMID 38300324›Full record

ArticlePlanta2024

A GARP transcription factor SlGCC positively regulates lateral root development in tomato via auxin-ethylene interplay.

Vinod Kumar, Adity Majee, Pooja Patwal, Babythoihoi Sairem, Aniruddha P Sane, Vidhu A Sane

Erratum issuedAbstract read
PubMed Publisher
In one paragraph

Article in Planta, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
1.2field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Vinod KumarMolecular Biology and Biotechnology, CSIR-National Botanical Research Institute, Lucknow, 226001, India.
Adity MajeeMolecular Biology and Biotechnology, CSIR-National Botanical Research Institute, Lucknow, 226001, India.
Pooja PatwalMolecular Biology and Biotechnology, CSIR-National Botanical Research Institute, Lucknow, 226001, India.
Babythoihoi SairemMolecular Biology and Biotechnology, CSIR-National Botanical Research Institute, Lucknow, 226001, India.
Aniruddha P SaneMolecular Biology and Biotechnology, CSIR-National Botanical Research Institute, Lucknow, 226001, India.
Vidhu A SaneMolecular Biology and Biotechnology, CSIR-National Botanical Research Institute, Lucknow, 226001, India. va.sane@nbri.res.in.ORCID http://orcid.org/0000-0002-9775-7733
National Botanical Research Institute · IN

Funding

CSIR-National Botanical Research Institute BSC204CSIR-National Botanical Research Institute MLP007
6 · The paper itself

Abstract

MAIN

conclusionSlGCC, a GARP transcription factor, functions as a root-related transcriptional repressor. SlGCC synchronizes auxin and ethylene signaling involving SlPIN3 and SlIAA3 as intermediate targets sketching a molecular map for lateral root development in tomato. The root system is crucial for growth and development of plants as it performs basic functions such as providing mechanical support, nutrients and water uptake, pathogen resistance and responds to various stresses. SlGCC, a GARP family transcription factor (TF), exhibited predominant expression in age-dependent (initial to mature stages) tomato root. SlGCC is a transcriptional repressor and is regulated at a transcriptional and translational level by auxin and ethylene. Auxin and ethylene mediated SlGCC protein stability is governed via proteasome degradation pathway during lateral root (LR) growth development. SlGCC over-expressor (OE) and under-expressed (UE) tomato transgenic lines demonstrate its role in LR development. This study is an attempt to unravel the vital role of SlGCC in regulating tomato LR architecture.

Indexed as

Solanum lycopersicumTranscription FactorsEthylenesIndoleacetic AcidsProteasome Endopeptidase ComplexethyleneEthylenesIndoleacetic AcidsProteasome Endopeptidase ComplexTranscription FactorsAuxinEthyleneLateral root initiationPhytohormonesRoot developmentTranscription factor

Identifiers

PMID38300324
OpenAlexW4391443551

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.